RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CARMIL3Q8ND23 1372 aa12.34□□□□□ -0.43
NIF3L1-203ENST00000409129 NFIXQ14938 502 aa12.34□□□□□ -0.43
NIF3L1-203ENST00000409129 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
NIF3L1-203ENST00000409129 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
NIF3L1-203ENST00000409129 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
NIF3L1-203ENST00000409129 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 STARD3NLO95772 234 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 SERPINB2P05120 415 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
NIF3L1-203ENST00000409129 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
NIF3L1-203ENST00000409129 TEFQ10587 303 aa12.32□□□□□ -0.44
NIF3L1-203ENST00000409129 TEX13AQ9BXU3 409 aaPredicted RBP12.32□□□□□ -0.44
NIF3L1-203ENST00000409129 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
NIF3L1-203ENST00000409129 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
NIF3L1-203ENST00000409129 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
NIF3L1-203ENST00000409129 A0A087WZG4 1122 aa12.31□□□□□ -0.44
NIF3L1-203ENST00000409129 DDNO94850 711 aaPredicted RBP12.31□□□□□ -0.44
NIF3L1-203ENST00000409129 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
NIF3L1-203ENST00000409129 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
NIF3L1-203ENST00000409129 RGS19P49795 217 aa12.3□□□□□ -0.44
NIF3L1-203ENST00000409129 LTBP1Q14766 1721 aa12.3□□□□□ -0.44
NIF3L1-203ENST00000409129 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
NIF3L1-203ENST00000409129 TRPM7Q96QT4 1865 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 C2CD5Q86YS7 1000 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 CFAP53Q96M91 514 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 FMNL2Q96PY5 1086 aa12.29□□□□□ -0.44
NIF3L1-203ENST00000409129 TMEM88BA6NKF7 163 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 H0YIN7 160 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 TSKSQ9UJT2 592 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 TBC1D2BQ9UPU7 963 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
NIF3L1-203ENST00000409129 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
NIF3L1-203ENST00000409129 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
NIF3L1-203ENST00000409129 ZNF330Q9Y3S2 320 aaPredicted RBP12.27□□□□□ -0.45
NIF3L1-203ENST00000409129 KCNQ3O43525 872 aa12.26□□□□□ -0.45
NIF3L1-203ENST00000409129 C21orf2O43822 256 aa12.26□□□□□ -0.45
NIF3L1-203ENST00000409129 A1BGP04217 495 aa12.26□□□□□ -0.45
NIF3L1-203ENST00000409129 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-203ENST00000409129 BRIP1Q9BX63 1249 aa12.26□□□□□ -0.45
NIF3L1-203ENST00000409129 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
NIF3L1-203ENST00000409129 U2AF1L5P0DN76 240 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 PDE6BP35913 854 aa12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 U2AF1Q01081 240 aaKnown RBP eCLIP12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 EAPPQ56P03 285 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 LDHDQ86WU2 507 aa12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-203ENST00000409129 RASSF10A6NK89 507 aa12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 SCN7AQ01118 1682 aa12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 SETDB2Q96T68 719 aa12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
NIF3L1-203ENST00000409129 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.45
NIF3L1-203ENST00000409129 DEFB115Q30KQ5 88 aa12.23□□□□□ -0.45
NIF3L1-203ENST00000409129 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-203ENST00000409129 MCM10Q7L590 875 aa12.23□□□□□ -0.45
NIF3L1-203ENST00000409129 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-203ENST00000409129 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
NIF3L1-203ENST00000409129 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-203ENST00000409129 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-203ENST00000409129 GRM1Q13255 1194 aa12.22□□□□□ -0.45
NIF3L1-203ENST00000409129 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-203ENST00000409129 PRAMEF22A3QJZ6 481 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 SPDYE2BA6NHP3 402 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 NPHP1O15259 732 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 SPDYE6P0CI01 402 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 PIP4K2AP48426 406 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 SPDYE2Q495Y8 402 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 CNBD1Q8NA66 436 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 MCOLN1Q9GZU1 580 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
NIF3L1-203ENST00000409129 ST5P78524 1137 aa12.2□□□□□ -0.46
NIF3L1-203ENST00000409129 DCTN1Q14203 1278 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms