RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SLC4A8Q2Y0W8 1093 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 JARID2Q92833 1246 aaPredicted RBP5.9□□□□□ -1.47
SCN3A-203ENST00000409101 JAKMIP1Q96N16 626 aaKnown RBP5.9□□□□□ -1.47
SCN3A-203ENST00000409101 KAT14Q9H8E8 782 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 FANCIQ9NVI1 1328 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 MAP3K5Q99683 1374 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 FAM83GA6ND36 823 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 ZNF213O14771 459 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 COPS6Q7L5N1 327 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 CATIPQ7Z7H3 387 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 CEP131Q9UPN4 1083 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC196A0A1B0GTZ2 297 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 TANGO6Q9C0B7 1094 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 MBIPQ9NS73 344 aa5.9□□□□□ -1.47
SCN3A-203ENST00000409101 NSFL1CQ9UNZ2 370 aaKnown RBP5.9□□□□□ -1.47
SCN3A-203ENST00000409101 RNMTO43148 476 aaKnown RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 CEBPZQ03701 1054 aaKnown RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 SLFN5Q08AF3 891 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 FILIP1LQ4L180 1135 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 EAPPQ56P03 285 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 SLC12A7Q9Y666 1083 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 PI4KAP2A4QPH2 592 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 B4DLN1 442 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 IRS4O14654 1257 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 KINO60870 393 aaKnown RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 NEBLO76041 1014 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 BAG4O95429 457 aaKnown RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 MRPL12P52815 198 aaKnown RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC178Q5BJE1 867 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 PI4KAP1Q8N8J0 262 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 ZSCAN31Q96LW9 406 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 CHMP5Q9NZZ3 219 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 YEATS2Q9ULM3 1422 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 FBLN1P23142 703 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 PLS1Q14651 629 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 DACH1Q9UI36 760 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 TSPY2A6NKD2 308 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 TCIRG1Q13488 830 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 LARGE2Q8N3Y3 721 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 PDILTQ8N807 584 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC12Q8WUD4 166 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-203ENST00000409101 DRC1Q96MC2 740 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 PDE6BP35913 854 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 BCS1LQ9Y276 419 aa5.89□□□□□ -1.47
SCN3A-203ENST00000409101 GOLIM4O00461 696 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 TSPY3P0CV98 308 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 TSPY8P0CW00 308 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 KIF5BP33176 963 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 PRIM1P49642 420 aaKnown RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 TMEM266Q2M3C6 531 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 ARHGAP27Q6ZUM4 889 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 NIM1KQ8IY84 436 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 FBXO3Q9UK99 471 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 PLCG2P16885 1265 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 CYP7A1P22680 504 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 TRAF1Q13077 416 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 MTHFSDQ2M296 383 aaKnown RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 DPY19L2Q6NUT2 758 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 RALGAPBQ86X10 1494 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 UFL1O94874 794 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 MSL1Q68DK7 614 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 HOOK2Q96ED9 719 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 PICK1Q9NRD5 415 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 TCOF1Q13428 1488 aaKnown RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 ECM2O94769 699 aaPredicted RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC173Q0VFZ6 552 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 FAM196AQ6ZSG2 479 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 CEP57L1Q8IYX8 460 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 TSPOAP1O95153 1857 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 KDM6BO15054 1643 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 IFIT3O14879 490 aaKnown RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 SMARCA5O60264 1052 aaPredicted RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 ANXA1P04083 346 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 ALDH1B1P30837 517 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 SSRP1Q08945 709 aaKnown RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 ATP2B3Q16720 1220 aa5.88□□□□□ -1.47
SCN3A-203ENST00000409101 NAA16Q6N069 864 aaPredicted RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 PUS7Q96PZ0 661 aaKnown RBP5.88□□□□□ -1.47
SCN3A-203ENST00000409101 PIK3C2GO75747 1445 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 HMGB1P09429 215 aaKnown RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 DPP8Q6V1X1 898 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 KRT27Q7Z3Y8 459 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC150Q8NCX0 1101 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 SMARCE1Q969G3 411 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 SNRKQ9NRH2 765 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 TMOD4Q9NZQ9 345 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 ZFYVE9O95405 1425 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 MFSD6Q6ZSS7 791 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 RAB34Q9BZG1 259 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 VAT1LQ9HCJ6 419 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC39Q9UFE4 941 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 GGA1Q9UJY5 639 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 LETM1O95202 739 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 LIG1P18858 919 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 EVI5LQ96CN4 794 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 GOLGA8AA7E2F4 631 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms