RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 ZSCAN22P10073 491 aaPredicted RBP12.4□□□□□ -0.42
PBRM1-205ENST00000409057 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
PBRM1-205ENST00000409057 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 ASXL1Q8IXJ9 1541 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 CCDC171Q6TFL3 1326 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 ANKRD18AQ8IVF6 992 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
PBRM1-205ENST00000409057 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
PBRM1-205ENST00000409057 A0A087WZG4 1122 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 FBLN1P23142 703 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
PBRM1-205ENST00000409057 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.43
PBRM1-205ENST00000409057 NUP160Q12769 1436 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 PI4KAP2A4QPH2 592 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 SDSP20132 328 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 ANAPC15P60006 121 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 PI4KAP1Q8N8J0 262 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 PAFAH1B1P43034 410 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 NAPBQ9H115 298 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
PBRM1-205ENST00000409057 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 YEATS4O95619 227 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 SMC5Q8IY18 1101 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 GIMAP7Q8NHV1 300 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 ZSCAN16Q9H4T2 348 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 ACEP12821 1306 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 MEIS3Q99687 375 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 USO1O60763 962 aaKnown RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-205ENST00000409057 TESK2Q96S53 571 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 BIN1O00499 593 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
PBRM1-205ENST00000409057 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 CPLX3Q8WVH0 158 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
PBRM1-205ENST00000409057 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
PBRM1-205ENST00000409057 MAP3K2Q9Y2U5 619 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 CCT2P78371 535 aaKnown RBP12.37□□□□□ -0.43
PBRM1-205ENST00000409057 GOLGA8BA8MQT2 603 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 ZNF213O14771 459 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 ZNF830Q96NB3 372 aaPredicted RBP12.37□□□□□ -0.43
PBRM1-205ENST00000409057 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
PBRM1-205ENST00000409057 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 MICALCLQ6ZW33 695 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 CCDC186Q7Z3E2 898 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 USP48Q86UV5 1035 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
PBRM1-205ENST00000409057 MINDY4BA8MYZ0 360 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 GNG11P61952 73 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 TIGD1Q96MW7 591 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 ATP10BO94823 1461 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
PBRM1-205ENST00000409057 BICDL1Q6ZP65 573 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 SKILP12757 684 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
PBRM1-205ENST00000409057 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
PBRM1-205ENST00000409057 ANXA1P04083 346 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 FGFR1OPO95684 399 aaKnown RBP12.35□□□□□ -0.43
PBRM1-205ENST00000409057 EZRP15311 586 aaKnown RBP12.35□□□□□ -0.43
PBRM1-205ENST00000409057 LMAN1P49257 510 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 PDE1AP54750 535 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 CCDC102BQ68D86 513 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
PBRM1-205ENST00000409057 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
PBRM1-205ENST00000409057 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
PBRM1-205ENST00000409057 ESYT1Q9BSJ8 1104 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
PBRM1-205ENST00000409057 TUBB4AP04350 444 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
PBRM1-205ENST00000409057 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
PBRM1-205ENST00000409057 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
PBRM1-205ENST00000409057 GOLIM4O00461 696 aa12.34□□□□□ -0.43
PBRM1-205ENST00000409057 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms