RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 HYPKQ9NX55 129 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 MAP3K2Q9Y2U5 619 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 TRIM27P14373 513 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 CHRNA2Q15822 529 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 DNAAF4Q8WXU2 420 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 PRIMPOLQ96LW4 560 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 FMNL2Q96PY5 1086 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 ZRANB1Q9UGI0 708 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 ZNF652Q9Y2D9 606 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 LRRFIP2Q9Y608 721 aaKnown RBP4.5□□□□□ -1.69
RGPD4-201ENST00000408999 IL16Q14005 1332 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 ZPR1O75312 459 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 RBM6P78332 1123 aaKnown RBP4.5□□□□□ -1.69
RGPD4-201ENST00000408999 ANKRD1Q15327 319 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 METTL24Q5JXM2 366 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 ANKRD20A12PQ8NF67 263 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 CCDC43Q96MW1 224 aaKnown RBP4.5□□□□□ -1.69
RGPD4-201ENST00000408999 RAI14Q9P0K7 980 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 NEO1Q92859 1461 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 BLMP54132 1417 aaPredicted RBP4.5□□□□□ -1.69
RGPD4-201ENST00000408999 TRPM1Q7Z4N2 1603 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 PLXNC1O60486 1568 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 PIK3R4Q99570 1358 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 MMP14P50281 582 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 IFNL2Q8IZJ0 200 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 RBM5P52756 815 aaKnown RBP eCLIP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 FLIIQ13045 1269 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 KIF1BPQ96EK5 621 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 JAKMIP1Q96N16 626 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 ZNF396Q96N95 335 aaPredicted RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 ZC3H13Q5T200 1668 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CRYBG3Q68DQ2 2970 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 OLFM4Q6UX06 510 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CADPS2Q86UW7 1296 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 AEBP1Q8IUX7 1158 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CEP126Q9P2H0 1117 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 PRPF40AO75400 957 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 TDO2P48775 406 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CEBPZQ03701 1054 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 NUP133Q8WUM0 1156 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 AKAP2Q9Y2D5 859 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 EXOC5O00471 708 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 MAP3K13O43283 966 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 LETM1O95202 739 aaPredicted RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 EIF4A2Q14240 407 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 HSP90AB2PQ58FF8 381 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CAVIN1Q6NZI2 390 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 ZNF592Q92610 1267 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 NAT10Q9H0A0 1025 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 DBF4Q9UBU7 674 aaPredicted RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 POLR3AO14802 1390 aaPredicted RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 PIK3C2GO75747 1445 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CASTP20810 708 aaKnown RBP4.49□□□□□ -1.69
RGPD4-201ENST00000408999 ATP2B2Q01814 1243 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 CEP89Q96ST8 783 aa4.49□□□□□ -1.69
RGPD4-201ENST00000408999 IDH1O75874 414 aaKnown RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 IRX5P78411 483 aaPredicted RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 AIDAQ96BJ3 306 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 NGLY1Q96IV0 654 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 TSPY26PQ9H489 355 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 LRP2BPQ9P2M1 347 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 TRMT112Q9UI30 125 aaKnown RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 DLG5Q8TDM6 1919 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 TSPOAP1O95153 1857 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 HECW2Q9P2P5 1572 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 FLT4P35916 1363 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 FIBPO43427 364 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 TRAK2O60296 914 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 HSP90AB3PQ58FF7 597 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 ZBTB3Q9H5J0 574 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 SYNMO15061 1565 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 CHPF2Q9P2E5 772 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 CTNNA3Q9UI47 895 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 NPHP3Q7Z494 1330 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 ANKRD18BA2A2Z9 1011 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 SLC5A1P13866 664 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 ATP2B1P20020 1258 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 PDCP20941 246 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 IFIT5Q13325 482 aaKnown RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 IMMTQ16891 758 aaKnown RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 PRPF40BQ6NWY9 871 aaKnown RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 BLOC1S2Q6QNY1 142 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 CCAR2Q8N163 923 aaKnown RBP4.48□□□□□ -1.69
RGPD4-201ENST00000408999 SLX1AQ9BQ83 275 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 BOLA2Q9H3K6 86 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 ANKIB1Q9P2G1 1089 aa4.48□□□□□ -1.69
RGPD4-201ENST00000408999 MAP3K5Q99683 1374 aa4.47□□□□□ -1.69
RGPD4-201ENST00000408999 GPTP24298 496 aa4.47□□□□□ -1.69
RGPD4-201ENST00000408999 STK38Q15208 465 aa4.47□□□□□ -1.69
RGPD4-201ENST00000408999 TRIM22Q8IYM9 498 aa4.47□□□□□ -1.69
RGPD4-201ENST00000408999 GOLGA6L1Q8N7Z2 621 aa4.47□□□□□ -1.69
RGPD4-201ENST00000408999 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 CDK5RAP3Q96JB5 506 aa4.47□□□□□ -1.69
RGPD4-201ENST00000408999 CCDC8Q9H0W5 538 aaPredicted RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 CWC25Q9NXE8 425 aaPredicted RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 GLRX3O76003 335 aaKnown RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 IFIT1P09914 478 aaKnown RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 NASPP49321 788 aaPredicted RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 MTHFSDQ2M296 383 aaKnown RBP4.47□□□□□ -1.69
RGPD4-201ENST00000408999 CAVIN4Q5BKX8 364 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 985.7 ms