RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 DZIP3Q86Y13 1208 aaKnown RBP16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
APOBEC3B-204ENST00000407298 BTBD11A6QL63 1104 aa16.49■□□□□ 0.23
APOBEC3B-204ENST00000407298 A1BGP04217 495 aa16.49■□□□□ 0.23
APOBEC3B-204ENST00000407298 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3B-204ENST00000407298 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
APOBEC3B-204ENST00000407298 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
APOBEC3B-204ENST00000407298 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
APOBEC3B-204ENST00000407298 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
APOBEC3B-204ENST00000407298 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
APOBEC3B-204ENST00000407298 AIDAQ96BJ3 306 aa16.48■□□□□ 0.23
APOBEC3B-204ENST00000407298 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
APOBEC3B-204ENST00000407298 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
APOBEC3B-204ENST00000407298 NPR1P16066 1061 aa16.47■□□□□ 0.23
APOBEC3B-204ENST00000407298 RGL2O15211 777 aa16.46■□□□□ 0.23
APOBEC3B-204ENST00000407298 TPTE2Q6XPS3 522 aa16.46■□□□□ 0.23
APOBEC3B-204ENST00000407298 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
APOBEC3B-204ENST00000407298 TAF1DQ9H5J8 278 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3B-204ENST00000407298 PRDM10Q9NQV6 1147 aa16.46■□□□□ 0.23
APOBEC3B-204ENST00000407298 CNTNAP1P78357 1384 aa16.46■□□□□ 0.23
APOBEC3B-204ENST00000407298 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
APOBEC3B-204ENST00000407298 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
APOBEC3B-204ENST00000407298 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
APOBEC3B-204ENST00000407298 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
APOBEC3B-204ENST00000407298 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
APOBEC3B-204ENST00000407298 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
APOBEC3B-204ENST00000407298 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 POTEJP0CG39 1038 aa16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 ALDH1B1P30837 517 aa16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 HACL1Q9UJ83 578 aa16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 COL11A2P13942 1736 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3B-204ENST00000407298 SCN4AP35499 1836 aa16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 PNMA8AQ86V59 439 aaPredicted RBP16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 NUDCQ9Y266 331 aa16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
APOBEC3B-204ENST00000407298 SIPA1L3O60292 1781 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3B-204ENST00000407298 FOXN1O15353 648 aa16.42■□□□□ 0.22
APOBEC3B-204ENST00000407298 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3B-204ENST00000407298 KCNQ3O43525 872 aa16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 ZNF277Q9NRM2 450 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 NIP7Q9Y221 180 aaKnown RBP eCLIP16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
APOBEC3B-204ENST00000407298 ITGBL1O95965 494 aaPredicted RBP16.4■□□□□ 0.22
APOBEC3B-204ENST00000407298 EPHX2P34913 555 aa16.4■□□□□ 0.22
APOBEC3B-204ENST00000407298 VEGFBP49765 207 aa16.4■□□□□ 0.22
APOBEC3B-204ENST00000407298 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
APOBEC3B-204ENST00000407298 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
APOBEC3B-204ENST00000407298 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
APOBEC3B-204ENST00000407298 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 CACNA1SQ13698 1873 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 FZD9O00144 591 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 DEFB115Q30KQ5 88 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 GPC2Q8N158 579 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 NYXQ9GZU5 481 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
APOBEC3B-204ENST00000407298 MAP2K1Q02750 393 aaPredicted RBP16.37■□□□□ 0.21
APOBEC3B-204ENST00000407298 PSMD1Q99460 953 aa16.37■□□□□ 0.21
APOBEC3B-204ENST00000407298 ZNF541Q9H0D2 1346 aa16.37■□□□□ 0.21
APOBEC3B-204ENST00000407298 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
APOBEC3B-204ENST00000407298 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
APOBEC3B-204ENST00000407298 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 LMOD1P29536 600 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 MCM10Q7L590 875 aa16.35■□□□□ 0.21
APOBEC3B-204ENST00000407298 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 LBX1P52954 281 aa16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 MAP1SQ66K74 1059 aaPredicted RBP16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 ABT1Q9ULW3 272 aaKnown RBP16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
APOBEC3B-204ENST00000407298 NEFMP07197 916 aa16.33■□□□□ 0.2
APOBEC3B-204ENST00000407298 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
APOBEC3B-204ENST00000407298 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
APOBEC3B-204ENST00000407298 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.2
APOBEC3B-204ENST00000407298 HLFQ16534 295 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms