RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 TNMDQ9H2S6 317 aa26.38■■□□□ 1.81
CUEDC1-202ENST00000407144 ESF1Q9H501 851 aaKnown RBP26.38■■□□□ 1.81
CUEDC1-202ENST00000407144 ATG3Q9NT62 314 aa26.38■■□□□ 1.81
CUEDC1-202ENST00000407144 DDX19AQ9NUU7 478 aaKnown RBP26.38■■□□□ 1.81
CUEDC1-202ENST00000407144 SKILP12757 684 aa26.37■■□□□ 1.81
CUEDC1-202ENST00000407144 APBB1O00213 710 aa26.37■■□□□ 1.81
CUEDC1-202ENST00000407144 SOX12O15370 315 aa26.37■■□□□ 1.81
CUEDC1-202ENST00000407144 ERCC6LQ2NKX8 1250 aa26.37■■□□□ 1.81
CUEDC1-202ENST00000407144 CFAP65Q6ZU64 1925 aaKnown RBP26.37■■□□□ 1.81
CUEDC1-202ENST00000407144 ZFYVE9O95405 1425 aa26.37■■□□□ 1.81
CUEDC1-202ENST00000407144 ZSCAN26Q16670 478 aa26.36■■□□□ 1.81
CUEDC1-202ENST00000407144 LRRFIP2Q9Y608 721 aaKnown RBP26.36■■□□□ 1.81
CUEDC1-202ENST00000407144 MROH2AA6NES4 1674 aa26.36■■□□□ 1.81
CUEDC1-202ENST00000407144 PRKAR2BP31323 418 aa26.36■■□□□ 1.81
CUEDC1-202ENST00000407144 TMCO3Q6UWJ1 677 aa26.36■■□□□ 1.81
CUEDC1-202ENST00000407144 ELL2O00472 640 aaPredicted RBP26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 PSEN1P49768 467 aa26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 IQUBQ8NA54 791 aa26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 C8orf58Q8NAV2 365 aa26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 PSD3Q9NYI0 1048 aa26.35■■□□□ 1.81
CUEDC1-202ENST00000407144 ZNF165P49910 485 aa26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 CCZ1BP86790 482 aa26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 CCZ1P86791 482 aaPredicted RBP26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 GOLGA6L1Q8N7Z2 621 aa26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 GOLGA5Q8TBA6 731 aa26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 CPSF1Q10570 1443 aaKnown RBP26.34■■□□□ 1.81
CUEDC1-202ENST00000407144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 LIG1P18858 919 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 HAP1P54257 671 aaPredicted RBP26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 KRT85P78386 507 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 FBXO18Q8NFZ0 1043 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 CLSTN2Q9H4D0 955 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 A0A1W2PP64 1363 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 UGGT1Q9NYU2 1555 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 SRLQ86TD4 932 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 C10orf67Q8IYJ2 551 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 CCDC191Q8NCU4 936 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 SMARCE1Q969G3 411 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 NCAPGQ9BPX3 1015 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 GGNBP2Q9H3C7 697 aa26.33■■□□□ 1.81
CUEDC1-202ENST00000407144 GUCY2CP25092 1073 aa26.32■■□□□ 1.8
CUEDC1-202ENST00000407144 TTC6Q86TZ1 520 aa26.32■■□□□ 1.8
CUEDC1-202ENST00000407144 MYCBPQ99417 103 aaPredicted RBP26.32■■□□□ 1.8
CUEDC1-202ENST00000407144 RNF216Q9NWF9 866 aaPredicted RBP26.32■■□□□ 1.8
CUEDC1-202ENST00000407144 CAMSAP1Q5T5Y3 1602 aa26.32■■□□□ 1.8
CUEDC1-202ENST00000407144 AK2P54819 239 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 AXDND1Q5T1B0 1012 aaPredicted RBP26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 RUFY3Q7L099 469 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 STAP2Q9UGK3 403 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 PPP6R1Q9UPN7 881 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 MSH6P52701 1360 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 CLGNO14967 610 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 CAMK4Q16566 473 aa26.31■■□□□ 1.8
CUEDC1-202ENST00000407144 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 ARHGAP29Q52LW3 1261 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 ZBTB9Q96C00 473 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 TTC21AQ8NDW8 1320 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 CCDC69A6NI79 296 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 GJB2P29033 226 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 LMOD3Q0VAK6 560 aa26.3■■□□□ 1.8
CUEDC1-202ENST00000407144 CDK12Q9NYV4 1490 aaPredicted RBP26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 AOX1Q06278 1338 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 TRIM66O15016 1216 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 TPM1P09493 284 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 CKAP2LQ8IYA6 745 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 AK7Q96M32 723 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 THUMPD2Q9BTF0 503 aaKnown RBP26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 DACT1Q9NYF0 836 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 FYB1O15117 783 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 POLR3GO15318 223 aaPredicted RBP26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 ST5P78524 1137 aa26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 SNW1Q13573 536 aaKnown RBP26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 NOM1Q5C9Z4 860 aaKnown RBP26.29■■□□□ 1.8
CUEDC1-202ENST00000407144 GSDMDP57764 484 aa26.28■■□□□ 1.8
CUEDC1-202ENST00000407144 ZSCAN31Q96LW9 406 aaPredicted RBP26.28■■□□□ 1.8
CUEDC1-202ENST00000407144 MEIS3Q99687 375 aa26.28■■□□□ 1.8
CUEDC1-202ENST00000407144 LCMT1Q9UIC8 334 aa26.28■■□□□ 1.8
CUEDC1-202ENST00000407144 SNX14Q9Y5W7 946 aa26.28■■□□□ 1.8
CUEDC1-202ENST00000407144 NPHP3Q7Z494 1330 aa26.28■■□□□ 1.8
CUEDC1-202ENST00000407144 A0A1B0GUL7 405 aa26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 NPHP1O15259 732 aa26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 KCNJ6P48051 423 aa26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 FBXO31Q5XUX0 539 aaPredicted RBP26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 EXOC4Q96A65 974 aa26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 ORC3Q9UBD5 711 aaPredicted RBP26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 SH2B1Q9NRF2 756 aaPredicted RBP26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 TRMT1Q9NXH9 659 aaKnown RBP26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 RRP15Q9Y3B9 282 aaKnown RBP26.27■■□□□ 1.8
CUEDC1-202ENST00000407144 PSDA5PKW4 1024 aaPredicted RBP26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 GOLGA6L19H0YKK7 550 aa26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 IQCB1Q15051 598 aa26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 RILPL2Q969X0 211 aa26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 SIRT1Q96EB6 747 aa26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 SCAND2PQ9GZW5 306 aaPredicted RBP26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 PLEKHG2Q9H7P9 1386 aa26.26■■□□□ 1.79
CUEDC1-202ENST00000407144 ARID5BQ14865 1188 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms