RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 IL15P40933 162 aaPredicted RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 LARP1BQ659C4 914 aaKnown RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 TRIM22Q8IYM9 498 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 ZPR1O75312 459 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 ANXA1P04083 346 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 ZFYP08048 801 aaPredicted RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 KRT24Q2M2I5 525 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 NBPF6Q5VWK0 638 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 NFATC2IPQ8NCF5 419 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 UBE2Q2Q8WVN8 375 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 NBPF4Q96M43 638 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 NAT10Q9H0A0 1025 aaKnown RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 LIMCH1Q9UPQ0 1083 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 NRXN1Q9ULB1 1477 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 UQCRFS1P1P0C7P4 283 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 CASTP20810 708 aaKnown RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 MAP3K12Q12852 859 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 SLC39A6Q13433 755 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 PRPF40BQ6NWY9 871 aaKnown RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 ZNF790Q6PG37 636 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 CDC5LQ99459 802 aaKnown RBP5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 CFAP45Q9UL16 551 aa5.62□□□□□ -1.51
PCDH11X-207ENST00000406881 VWDEQ8N2E2 1590 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 TPM1P09493 284 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 NASPP49321 788 aaPredicted RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 TPD52L1Q16890 204 aaPredicted RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 CAVIN4Q5BKX8 364 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 PLEKHM2Q8IWE5 1019 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 ANKRD20A12PQ8NF67 263 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 CABLES1Q8TDN4 633 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 WASF1Q92558 559 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 ESYT1Q9BSJ8 1104 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 ATP5J2-PTCD1G3V325 749 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 KINO60870 393 aaKnown RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 EIF4A1P60842 406 aaKnown RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 CAVIN1Q6NZI2 390 aaKnown RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 AIDAQ96BJ3 306 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 SLC52A2Q9HAB3 445 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 LRP2BPQ9P2M1 347 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 ERBB4Q15303 1308 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 RIMBP3CA6NJZ7 1639 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 RIMBP3BA6NNM3 1639 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 RIMBP3Q9UFD9 1639 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC69A6NI79 296 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 EPB41L2O43491 1005 aaKnown RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 IDH1O75874 414 aaKnown RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 TPM2P07951 284 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 ZNF853P0CG23 659 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 HMGN5P82970 282 aaKnown RBP5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 NEXMIFQ5QGS0 1516 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 LDHAL6AQ6ZMR3 332 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 ARHGEF25Q86VW2 580 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 RAD50Q92878 1312 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 TSPY26PQ9H489 355 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 SLAIN2Q9P270 581 aa5.61□□□□□ -1.51
PCDH11X-207ENST00000406881 TDO2P48775 406 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 STK38Q15208 465 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 DDB1Q16531 1140 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 G2E3Q7L622 706 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 PLBD2Q8NHP8 589 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 SDF4Q9BRK5 362 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 METTL22Q9BUU2 404 aaPredicted RBP5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 RAI14Q9P0K7 980 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 TMEM94Q12767 1356 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 USP31Q70CQ4 1352 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 ERVV-2B6SEH9 535 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 FIBPO43427 364 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 FBXW7Q969H0 707 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 UPF3BQ9BZI7 483 aaKnown RBP5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 QRICH2Q9H0J4 1663 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 TULP4Q9NRJ4 1543 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 PNPLA6Q8IY17 1366 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 LMBR1LQ6UX01 489 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 IL17REQ8NFR9 667 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 RNF41Q9H4P4 317 aaPredicted RBP5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC39Q9UFE4 941 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 ARHGEF40Q8TER5 1519 aa5.6□□□□□ -1.51
PCDH11X-207ENST00000406881 A0A0U1RQG5 324 aaPredicted RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC196A0A1B0GTZ2 297 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC173Q0VFZ6 552 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 TSR1Q2NL82 804 aaKnown RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC152Q4G0S7 254 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 RRP12Q5JTH9 1297 aaKnown RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC85AQ96PX6 553 aaPredicted RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 UBAC1Q9BSL1 405 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 PHAXQ9H814 394 aaKnown RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 ZNF287Q9HBT7 754 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 LGR6Q9HBX8 967 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 CPSF1Q10570 1443 aaKnown RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 DEPDC5O75140 1603 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 USP19O94966 1318 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 GPTP24298 496 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 HSP90AA2PQ14568 343 aaPredicted RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 OLFM4Q6UX06 510 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 SCAND2PQ9GZW5 306 aaPredicted RBP5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 ADGRL3Q9HAR2 1447 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC192P0DO97 292 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 RBM25P49756 843 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms