RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 LTBP3Q9NS15 1303 aa28.16■■■□□ 2.1
RHBDD3-202ENST00000406335 IQCA1LA6NCM1 817 aa28.15■■■□□ 2.1
RHBDD3-202ENST00000406335 RTF1Q92541 710 aaKnown RBP28.15■■■□□ 2.1
RHBDD3-202ENST00000406335 PRKAR2BP31323 418 aa28.14■■■□□ 2.1
RHBDD3-202ENST00000406335 USP16Q9Y5T5 823 aa28.14■■■□□ 2.1
RHBDD3-202ENST00000406335 COL3A1P02461 1466 aaPredicted RBP28.14■■■□□ 2.09
RHBDD3-202ENST00000406335 NUDCQ9Y266 331 aa28.13■■■□□ 2.09
RHBDD3-202ENST00000406335 DLEC1Q9Y238 1755 aa28.13■■■□□ 2.09
RHBDD3-202ENST00000406335 TIAM2Q8IVF5 1701 aa28.12■■■□□ 2.09
RHBDD3-202ENST00000406335 POTEIP0CG38 1075 aa28.12■■■□□ 2.09
RHBDD3-202ENST00000406335 POTEJP0CG39 1038 aa28.12■■■□□ 2.09
RHBDD3-202ENST00000406335 CCDC93Q567U6 631 aa28.12■■■□□ 2.09
RHBDD3-202ENST00000406335 PHACTR3Q96KR7 559 aa28.12■■■□□ 2.09
RHBDD3-202ENST00000406335 FAM177BA6PVY3 158 aa28.11■■■□□ 2.09
RHBDD3-202ENST00000406335 TPTE2Q6XPS3 522 aa28.11■■■□□ 2.09
RHBDD3-202ENST00000406335 CLEC11AQ9Y240 323 aa28.11■■■□□ 2.09
RHBDD3-202ENST00000406335 SNRPA1P09661 255 aaKnown RBP28.1■■■□□ 2.09
RHBDD3-202ENST00000406335 GTF2E1P29083 439 aaPredicted RBP28.1■■■□□ 2.09
RHBDD3-202ENST00000406335 EAPPQ56P03 285 aaPredicted RBP28.1■■■□□ 2.09
RHBDD3-202ENST00000406335 CLEC4GQ6UXB4 293 aa28.1■■■□□ 2.09
RHBDD3-202ENST00000406335 UBR2Q8IWV8 1755 aa28.09■■■□□ 2.09
RHBDD3-202ENST00000406335 NPR1P16066 1061 aa28.09■■■□□ 2.09
RHBDD3-202ENST00000406335 LDHDQ86WU2 507 aa28.08■■■□□ 2.09
RHBDD3-202ENST00000406335 NIP7Q9Y221 180 aaKnown RBP eCLIP28.08■■■□□ 2.09
RHBDD3-202ENST00000406335 PRAMEF22A3QJZ6 481 aa28.07■■■□□ 2.08
RHBDD3-202ENST00000406335 U2AF1L5P0DN76 240 aaPredicted RBP28.07■■■□□ 2.08
RHBDD3-202ENST00000406335 U2AF1Q01081 240 aaKnown RBP eCLIP28.07■■■□□ 2.08
RHBDD3-202ENST00000406335 CEMIPQ8WUJ3 1361 aa28.07■■■□□ 2.08
RHBDD3-202ENST00000406335 MCM10Q7L590 875 aa28.06■■■□□ 2.08
RHBDD3-202ENST00000406335 TAF1DQ9H5J8 278 aaPredicted RBP28.06■■■□□ 2.08
RHBDD3-202ENST00000406335 ZNF277Q9NRM2 450 aaPredicted RBP28.06■■■□□ 2.08
RHBDD3-202ENST00000406335 FKBP4Q02790 459 aaKnown RBP eCLIP28.05■■■□□ 2.08
RHBDD3-202ENST00000406335 AIDAQ96BJ3 306 aa28.05■■■□□ 2.08
RHBDD3-202ENST00000406335 RSPH6AQ9H0K4 717 aa28.05■■■□□ 2.08
RHBDD3-202ENST00000406335 CCDC88AQ3V6T2 1871 aa28.04■■■□□ 2.08
RHBDD3-202ENST00000406335 RTKN2Q8IZC4 609 aa28.04■■■□□ 2.08
RHBDD3-202ENST00000406335 SCN7AQ01118 1682 aa28.03■■■□□ 2.08
RHBDD3-202ENST00000406335 ALDH1B1P30837 517 aa28.03■■■□□ 2.08
RHBDD3-202ENST00000406335 HACL1Q9UJ83 578 aa28.03■■■□□ 2.08
RHBDD3-202ENST00000406335 ANKRD31Q8N7Z5 1873 aa28.03■■■□□ 2.08
RHBDD3-202ENST00000406335 TMEM88BA6NKF7 163 aa28.01■■■□□ 2.07
RHBDD3-202ENST00000406335 C7orf43Q8WVR3 580 aa28.01■■■□□ 2.07
RHBDD3-202ENST00000406335 L3MBTL3Q96JM7 780 aaPredicted RBP28.01■■■□□ 2.07
RHBDD3-202ENST00000406335 PPP2R1AP30153 589 aa28■■■□□ 2.07
RHBDD3-202ENST00000406335 DCTN1Q14203 1278 aa28■■■□□ 2.07
RHBDD3-202ENST00000406335 NGEFQ8N5V2 710 aa28■■■□□ 2.07
RHBDD3-202ENST00000406335 COL11A2P13942 1736 aaPredicted RBP27.99■■■□□ 2.07
RHBDD3-202ENST00000406335 OLFM4Q6UX06 510 aa27.99■■■□□ 2.07
RHBDD3-202ENST00000406335 SYNE4Q8N205 404 aa27.99■■■□□ 2.07
RHBDD3-202ENST00000406335 CNTNAP1P78357 1384 aa27.99■■■□□ 2.07
RHBDD3-202ENST00000406335 PCNTO95613 3336 aa27.98■■■□□ 2.07
RHBDD3-202ENST00000406335 ZNF541Q9H0D2 1346 aa27.98■■■□□ 2.07
RHBDD3-202ENST00000406335 FOXN1O15353 648 aa27.98■■■□□ 2.07
RHBDD3-202ENST00000406335 EPHX2P34913 555 aa27.98■■■□□ 2.07
RHBDD3-202ENST00000406335 JDP2Q8WYK2 163 aa27.98■■■□□ 2.07
RHBDD3-202ENST00000406335 FER1L6Q2WGJ9 1857 aa27.98■■■□□ 2.07
RHBDD3-202ENST00000406335 SLX4Q8IY92 1834 aa27.97■■■□□ 2.07
RHBDD3-202ENST00000406335 PASKQ96RG2 1323 aa27.97■■■□□ 2.07
RHBDD3-202ENST00000406335 NEFMP07197 916 aa27.97■■■□□ 2.07
RHBDD3-202ENST00000406335 IARSP41252 1262 aaKnown RBP27.97■■■□□ 2.07
RHBDD3-202ENST00000406335 PNMA8AQ86V59 439 aaPredicted RBP27.97■■■□□ 2.07
RHBDD3-202ENST00000406335 KLRG2A4D1S0 409 aaPredicted RBP27.96■■■□□ 2.07
RHBDD3-202ENST00000406335 NBPF26B4DH59 902 aa27.96■■■□□ 2.07
RHBDD3-202ENST00000406335 VEGFBP49765 207 aa27.96■■■□□ 2.07
RHBDD3-202ENST00000406335 NBPF10Q6P3W6 841 aaKnown RBP27.96■■■□□ 2.07
RHBDD3-202ENST00000406335 NBPF15Q8N660 670 aa27.96■■■□□ 2.07
RHBDD3-202ENST00000406335 TAF7Q15545 349 aaPredicted RBP27.95■■■□□ 2.06
RHBDD3-202ENST00000406335 HLFQ16534 295 aa27.95■■■□□ 2.06
RHBDD3-202ENST00000406335 MIS18AQ9NYP9 233 aa27.95■■■□□ 2.06
RHBDD3-202ENST00000406335 RNF123Q5XPI4 1314 aa27.94■■■□□ 2.06
RHBDD3-202ENST00000406335 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
RHBDD3-202ENST00000406335 CTCFP49711 727 aaPredicted RBP27.94■■■□□ 2.06
RHBDD3-202ENST00000406335 CNTROBQ8N137 903 aa27.94■■■□□ 2.06
RHBDD3-202ENST00000406335 NYXQ9GZU5 481 aa27.94■■■□□ 2.06
RHBDD3-202ENST00000406335 RGL2O15211 777 aa27.93■■■□□ 2.06
RHBDD3-202ENST00000406335 ITGBL1O95965 494 aaPredicted RBP27.93■■■□□ 2.06
RHBDD3-202ENST00000406335 EIF6P56537 245 aaKnown RBP27.93■■■□□ 2.06
RHBDD3-202ENST00000406335 GJA3Q9Y6H8 435 aa27.93■■■□□ 2.06
RHBDD3-202ENST00000406335 MAP1SQ66K74 1059 aaPredicted RBP27.92■■■□□ 2.06
RHBDD3-202ENST00000406335 RPGRQ92834 1020 aaKnown RBP27.92■■■□□ 2.06
RHBDD3-202ENST00000406335 PRDM10Q9NQV6 1147 aa27.92■■■□□ 2.06
RHBDD3-202ENST00000406335 DICER1Q9UPY3 1922 aaKnown RBP27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 LMOD1P29536 600 aaPredicted RBP27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 DEFB115Q30KQ5 88 aa27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 KIF6Q6ZMV9 814 aa27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 GPC2Q8N158 579 aa27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 ABT1Q9ULW3 272 aaKnown RBP27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 SIPA1L3O60292 1781 aaPredicted RBP27.91■■■□□ 2.06
RHBDD3-202ENST00000406335 FZD9O00144 591 aa27.9■■■□□ 2.06
RHBDD3-202ENST00000406335 NUTM1Q86Y26 1132 aa27.9■■■□□ 2.06
RHBDD3-202ENST00000406335 RRP7AQ9Y3A4 280 aaKnown RBP27.9■■■□□ 2.06
RHBDD3-202ENST00000406335 CC2D2BQ6DHV5 1058 aa27.88■■■□□ 2.05
RHBDD3-202ENST00000406335 PNISRQ8TF01 805 aaKnown RBP27.88■■■□□ 2.05
RHBDD3-202ENST00000406335 TMX4Q9H1E5 349 aaPredicted RBP27.88■■■□□ 2.05
RHBDD3-202ENST00000406335 TCERG1O14776 1098 aaKnown RBP27.87■■■□□ 2.05
RHBDD3-202ENST00000406335 DDX10Q13206 875 aaKnown RBP27.87■■■□□ 2.05
RHBDD3-202ENST00000406335 PAXIP1Q6ZW49 1069 aaPredicted RBP27.87■■■□□ 2.05
RHBDD3-202ENST00000406335 PSMD1Q99460 953 aa27.87■■■□□ 2.05
RHBDD3-202ENST00000406335 CACNA1SQ13698 1873 aa27.87■■■□□ 2.05
RHBDD3-202ENST00000406335 BCORQ6W2J9 1755 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms