RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ARFGEF2Q9Y6D5 1785 aa17.39■□□□□ 0.37
PRAME-205ENST00000405655 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
PRAME-205ENST00000405655 DNAJC10Q8IXB1 793 aa17.39■□□□□ 0.37
PRAME-205ENST00000405655 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
PRAME-205ENST00000405655 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
PRAME-205ENST00000405655 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
PRAME-205ENST00000405655 CDC45O75419 566 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 GCKRQ14397 625 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 SLC4A9Q96Q91 983 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 COL22A1Q8NFW1 1626 aaPredicted RBP17.38■□□□□ 0.37
PRAME-205ENST00000405655 ACSBG1Q96GR2 724 aa17.38■□□□□ 0.37
PRAME-205ENST00000405655 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
PRAME-205ENST00000405655 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
PRAME-205ENST00000405655 LAMB4A4D0S4 1761 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 DISP2A7MBM2 1401 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 UBAP1LF5GYI3 381 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 MX1P20591 662 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 ARXQ96QS3 562 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 KIF2CQ99661 725 aa17.37■□□□□ 0.37
PRAME-205ENST00000405655 UBE3BQ7Z3V4 1068 aa17.36■□□□□ 0.37
PRAME-205ENST00000405655 CHMP4AQ9BY43 222 aa17.36■□□□□ 0.37
PRAME-205ENST00000405655 TUBGCP6Q96RT7 1819 aa17.36■□□□□ 0.37
PRAME-205ENST00000405655 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
PRAME-205ENST00000405655 OS9Q13438 667 aaPredicted RBP17.36■□□□□ 0.37
PRAME-205ENST00000405655 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
PRAME-205ENST00000405655 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
PRAME-205ENST00000405655 EXOC5O00471 708 aa17.35■□□□□ 0.37
PRAME-205ENST00000405655 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
PRAME-205ENST00000405655 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
PRAME-205ENST00000405655 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
PRAME-205ENST00000405655 IL25Q9H293 177 aa17.33■□□□□ 0.37
PRAME-205ENST00000405655 TNS2Q63HR2 1409 aa17.33■□□□□ 0.36
PRAME-205ENST00000405655 A0A087WZG4 1122 aa17.33■□□□□ 0.36
PRAME-205ENST00000405655 UTYO14607 1347 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 SPATA31A1Q5TZJ5 1347 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 SASH1O94885 1247 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 NRAPQ86VF7 1730 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 C8orf37Q96NL8 207 aa17.32■□□□□ 0.36
PRAME-205ENST00000405655 TLR7Q9NYK1 1049 aaKnown RBP17.32■□□□□ 0.36
PRAME-205ENST00000405655 TOM1O60784 492 aa17.31■□□□□ 0.36
PRAME-205ENST00000405655 MTX1Q13505 466 aa17.31■□□□□ 0.36
PRAME-205ENST00000405655 SYNE4Q8N205 404 aa17.31■□□□□ 0.36
PRAME-205ENST00000405655 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
PRAME-205ENST00000405655 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
PRAME-205ENST00000405655 RBM25P49756 843 aaKnown RBP17.3■□□□□ 0.36
PRAME-205ENST00000405655 MARCH10Q8NA82 808 aaPredicted RBP17.3■□□□□ 0.36
PRAME-205ENST00000405655 PI4K2BQ8TCG2 481 aa17.3■□□□□ 0.36
PRAME-205ENST00000405655 CCDC8Q9H0W5 538 aaPredicted RBP17.3■□□□□ 0.36
PRAME-205ENST00000405655 KIF1BPQ96EK5 621 aa17.3■□□□□ 0.36
PRAME-205ENST00000405655 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
PRAME-205ENST00000405655 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
PRAME-205ENST00000405655 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 EP400Q96L91 3159 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 KCNQ2O43526 872 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 CASP7P55210 303 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 KCNQ4P56696 695 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 FAM182BQ5T319 152 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 USP26Q9BXU7 913 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 AK9Q5TCS8 1911 aa17.29■□□□□ 0.36
PRAME-205ENST00000405655 BCL9O00512 1426 aa17.28■□□□□ 0.36
PRAME-205ENST00000405655 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
PRAME-205ENST00000405655 DDB1Q16531 1140 aa17.28■□□□□ 0.36
PRAME-205ENST00000405655 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
PRAME-205ENST00000405655 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
PRAME-205ENST00000405655 HLFQ16534 295 aa17.28■□□□□ 0.36
PRAME-205ENST00000405655 EAF2Q96CJ1 260 aaPredicted RBP17.28■□□□□ 0.36
PRAME-205ENST00000405655 TJP1Q07157 1748 aa17.27■□□□□ 0.36
PRAME-205ENST00000405655 AACSQ86V21 672 aa17.27■□□□□ 0.36
PRAME-205ENST00000405655 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
PRAME-205ENST00000405655 GPTP24298 496 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 SMIM5Q71RC9 77 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
PRAME-205ENST00000405655 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 CHMLP26374 656 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
PRAME-205ENST00000405655 BECN1Q14457 450 aa17.26■□□□□ 0.35
PRAME-205ENST00000405655 FOXO4P98177 505 aa17.25■□□□□ 0.35
PRAME-205ENST00000405655 NGLY1Q96IV0 654 aa17.25■□□□□ 0.35
PRAME-205ENST00000405655 CYP19A1P11511 503 aaPredicted RBP17.25■□□□□ 0.35
PRAME-205ENST00000405655 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
PRAME-205ENST00000405655 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRAME-205ENST00000405655 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
PRAME-205ENST00000405655 H7C1W4 665 aa17.23■□□□□ 0.35
PRAME-205ENST00000405655 TFCP2Q12800 502 aa17.23■□□□□ 0.35
PRAME-205ENST00000405655 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
PRAME-205ENST00000405655 FAM89AQ96GI7 184 aa17.23■□□□□ 0.35
PRAME-205ENST00000405655 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
PRAME-205ENST00000405655 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
PRAME-205ENST00000405655 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms