RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 CEMIPQ8WUJ3 1361 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 ZPR1O75312 459 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 DCTN1Q14203 1278 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 TAF7Q15545 349 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-204ENST00000405578 CCDC27Q2M243 656 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
RPAIN-204ENST00000405578 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
RPAIN-204ENST00000405578 LBX1P52954 281 aa13.74□□□□□ -0.21
RPAIN-204ENST00000405578 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
RPAIN-204ENST00000405578 C2CD5Q86YS7 1000 aa13.74□□□□□ -0.21
RPAIN-204ENST00000405578 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
RPAIN-204ENST00000405578 NFIXQ14938 502 aa13.73□□□□□ -0.21
RPAIN-204ENST00000405578 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
RPAIN-204ENST00000405578 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
RPAIN-204ENST00000405578 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
RPAIN-204ENST00000405578 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-204ENST00000405578 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-204ENST00000405578 VEGFBP49765 207 aa13.72□□□□□ -0.21
RPAIN-204ENST00000405578 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
RPAIN-204ENST00000405578 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
RPAIN-204ENST00000405578 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
RPAIN-204ENST00000405578 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 H0YIN7 160 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 SERPINB2P05120 415 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 ZNF790Q6PG37 636 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-204ENST00000405578 TSPYL4Q9UJ04 414 aa13.71□□□□□ -0.21
RPAIN-204ENST00000405578 LAS1LQ9Y4W2 734 aaKnown RBP13.71□□□□□ -0.21
RPAIN-204ENST00000405578 SLX4Q8IY92 1834 aa13.71□□□□□ -0.22
RPAIN-204ENST00000405578 COL15A1P39059 1388 aa13.71□□□□□ -0.22
RPAIN-204ENST00000405578 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
RPAIN-204ENST00000405578 DDNO94850 711 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-204ENST00000405578 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
RPAIN-204ENST00000405578 GNAI1P63096 354 aa13.7□□□□□ -0.22
RPAIN-204ENST00000405578 WDR63Q8IWG1 891 aa13.7□□□□□ -0.22
RPAIN-204ENST00000405578 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
RPAIN-204ENST00000405578 MRC1P22897 1456 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 ADAMTSL1Q8N6G6 1762 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 C21orf2O43822 256 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
RPAIN-204ENST00000405578 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 IFT57Q9NWB7 429 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
RPAIN-204ENST00000405578 IL16Q14005 1332 aa13.68□□□□□ -0.22
RPAIN-204ENST00000405578 TMEM88BA6NKF7 163 aa13.68□□□□□ -0.22
RPAIN-204ENST00000405578 MLLT1Q03111 559 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-204ENST00000405578 SLC39A6Q13433 755 aa13.68□□□□□ -0.22
RPAIN-204ENST00000405578 LDHDQ86WU2 507 aa13.68□□□□□ -0.22
RPAIN-204ENST00000405578 ZNF622Q969S3 477 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPAIN-204ENST00000405578 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
RPAIN-204ENST00000405578 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
RPAIN-204ENST00000405578 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-204ENST00000405578 TAOK3Q9H2K8 898 aa13.67□□□□□ -0.22
RPAIN-204ENST00000405578 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
RPAIN-204ENST00000405578 UBR2Q8IWV8 1755 aa13.67□□□□□ -0.22
RPAIN-204ENST00000405578 CCDC85CA6NKD9 419 aa13.66□□□□□ -0.22
RPAIN-204ENST00000405578 CHL1O00533 1208 aa13.66□□□□□ -0.22
RPAIN-204ENST00000405578 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-204ENST00000405578 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
RPAIN-204ENST00000405578 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
RPAIN-204ENST00000405578 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
RPAIN-204ENST00000405578 ZBTB1Q9Y2K1 713 aa13.66□□□□□ -0.22
RPAIN-204ENST00000405578 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
RPAIN-204ENST00000405578 IQCA1LA6NCM1 817 aa13.65□□□□□ -0.22
RPAIN-204ENST00000405578 STARD3NLO95772 234 aa13.65□□□□□ -0.22
RPAIN-204ENST00000405578 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
RPAIN-204ENST00000405578 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-204ENST00000405578 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-204ENST00000405578 TRPM7Q96QT4 1865 aa13.64□□□□□ -0.23
RPAIN-204ENST00000405578 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-204ENST00000405578 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
RPAIN-204ENST00000405578 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
RPAIN-204ENST00000405578 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
RPAIN-204ENST00000405578 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
RPAIN-204ENST00000405578 E9PSI1 815 aa13.63□□□□□ -0.23
RPAIN-204ENST00000405578 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
RPAIN-204ENST00000405578 EIF4A1P60842 406 aaKnown RBP13.63□□□□□ -0.23
RPAIN-204ENST00000405578 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-204ENST00000405578 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-204ENST00000405578 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
RPAIN-204ENST00000405578 PDE4DIPQ5VU43 2346 aa13.63□□□□□ -0.23
RPAIN-204ENST00000405578 HEG1Q9ULI3 1381 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 KCNQ3O43525 872 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 PDE6BP35913 854 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 RGS19P49795 217 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
RPAIN-204ENST00000405578 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 BCORQ6W2J9 1755 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
RPAIN-204ENST00000405578 CASP8AP2Q9UKL3 1982 aa13.62□□□□□ -0.23
RPAIN-204ENST00000405578 CANXP27824 592 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 872.6 ms