RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 PDILTQ8N807 584 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 NFATC2IPQ8NCF5 419 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 FEZ1Q99689 392 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 EHMT1Q9H9B1 1298 aa13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF3-204ENST00000405493 TRAF1Q13077 416 aa13.83□□□□□ -0.19
RAPGEF3-204ENST00000405493 TMEM57Q8N5G2 664 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 CNBD1Q8NA66 436 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 NAPBQ9H115 298 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 TSPOAP1O95153 1857 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 LETM1O95202 739 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 JMYQ8N9B5 988 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 FIBPO43427 364 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 ZNF76P36508 570 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 NAP1L1P55209 391 aaKnown RBP13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 EYA1Q99502 592 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 TSPY26PQ9H489 355 aa13.83□□□□□ -0.2
RAPGEF3-204ENST00000405493 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 PI4KAP2A4QPH2 592 aa13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 RNMTO43148 476 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 COPS6Q7L5N1 327 aa13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 PI4KAP1Q8N8J0 262 aa13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 PDE6BP35913 854 aa13.82□□□□□ -0.2
RAPGEF3-204ENST00000405493 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 ZNF396Q96N95 335 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 H0YIN7 160 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 SSH1Q8WYL5 1049 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
RAPGEF3-204ENST00000405493 PDIA4P13667 645 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 TEX35Q5T0J7 233 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 WDR78Q5VTH9 848 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 CUL5Q93034 780 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 EPS15P42566 896 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 TNNI2P48788 182 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 CWC27Q6UX04 472 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-204ENST00000405493 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 SMC2O95347 1197 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 PLCG2P16885 1265 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 STK38Q15208 465 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 TRIM5Q9C035 493 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 ARAP3Q8WWN8 1544 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 PLEKHH1Q9ULM0 1364 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 PDE4BQ07343 736 aa13.79□□□□□ -0.2
RAPGEF3-204ENST00000405493 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 HOOK2Q96ED9 719 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 MNS1Q8NEH6 495 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 MX1P20591 662 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 ZSCAN30Q86W11 494 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-204ENST00000405493 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 RARSP54136 660 aaKnown RBP13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 C20orf194Q5TEA3 1177 aa13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF3-204ENST00000405493 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 DNAI2Q9GZS0 605 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 F6X3S4 739 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 CERKQ8TCT0 537 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 BEGAINQ9BUH8 593 aa13.77□□□□□ -0.21
RAPGEF3-204ENST00000405493 ERVK-7P63135 1459 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 GPR162Q16538 588 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 UBE2Q2Q8WVN8 375 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 HOXB7P09629 217 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 TTLL5Q6EMB2 1281 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms