RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
CLIP4-203ENST00000401617 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
CLIP4-203ENST00000401617 KIF2CQ99661 725 aa15.11■□□□□ 0.01
CLIP4-203ENST00000401617 MYD88Q99836 296 aa15.11■□□□□ 0.01
CLIP4-203ENST00000401617 NWD2Q9ULI1 1742 aa15.1■□□□□ 0.01
CLIP4-203ENST00000401617 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
CLIP4-203ENST00000401617 PIGBQ92521 554 aa15.1■□□□□ 0.01
CLIP4-203ENST00000401617 USP42Q9H9J4 1324 aaKnown RBP15.09■□□□□ 0.01
CLIP4-203ENST00000401617 BICC1Q9H694 974 aaKnown RBP15.09■□□□□ 0.01
CLIP4-203ENST00000401617 BCL11AQ9H165 835 aa15.09■□□□□ 0.01
CLIP4-203ENST00000401617 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
CLIP4-203ENST00000401617 BCL9O00512 1426 aa15.08■□□□□ 0.01
CLIP4-203ENST00000401617 TOM1O60784 492 aa15.08■□□□□ 0.01
CLIP4-203ENST00000401617 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0.01
CLIP4-203ENST00000401617 SNX21Q969T3 373 aa15.08■□□□□ 0.01
CLIP4-203ENST00000401617 CDCA7Q9BWT1 371 aaPredicted RBP15.08■□□□□ 0.01
CLIP4-203ENST00000401617 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0.01
CLIP4-203ENST00000401617 AK9Q5TCS8 1911 aa15.08■□□□□ 0
CLIP4-203ENST00000401617 A1BGP04217 495 aa15.08■□□□□ 0
CLIP4-203ENST00000401617 CASP7P55210 303 aa15.08■□□□□ 0
CLIP4-203ENST00000401617 TEX13AQ9BXU3 409 aaPredicted RBP15.08■□□□□ 0
CLIP4-203ENST00000401617 ATG3Q9NT62 314 aa15.08■□□□□ 0
CLIP4-203ENST00000401617 SPATA31A1Q5TZJ5 1347 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 EXOC5O00471 708 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 CASC1Q6TDU7 716 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 USP26Q9BXU7 913 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 PI4K2BQ8TCG2 481 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 TJP1Q07157 1748 aa15.07■□□□□ 0
CLIP4-203ENST00000401617 SLIT2O94813 1529 aa15.06■□□□□ 0
CLIP4-203ENST00000401617 RABL6Q3YEC7 729 aaPredicted RBP15.06■□□□□ 0
CLIP4-203ENST00000401617 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
CLIP4-203ENST00000401617 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
CLIP4-203ENST00000401617 NUTM1Q86Y26 1132 aa15.05■□□□□ 0
CLIP4-203ENST00000401617 PA2G4Q9UQ80 394 aaKnown RBP15.05■□□□□ 0
CLIP4-203ENST00000401617 H7C1W4 665 aa15.05■□□□□ -0
CLIP4-203ENST00000401617 ANTXR1Q9H6X2 564 aa15.05■□□□□ -0
CLIP4-203ENST00000401617 TTC41PQ6P2S7 1318 aa15.04■□□□□ -0
CLIP4-203ENST00000401617 ERC2O15083 957 aa15.04■□□□□ -0
CLIP4-203ENST00000401617 ADAMTS2O95450 1211 aa15.04■□□□□ -0
CLIP4-203ENST00000401617 DOT1LQ8TEK3 1739 aa15.04■□□□□ -0
CLIP4-203ENST00000401617 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.04■□□□□ -0
CLIP4-203ENST00000401617 SPATA31A5Q5VU36 1347 aa15.04■□□□□ -0
CLIP4-203ENST00000401617 SPATA31A7Q8IWB4 1347 aa15.04■□□□□ -0
CLIP4-203ENST00000401617 A0A087WZG4 1122 aa15.03■□□□□ -0
CLIP4-203ENST00000401617 ATP5J2-PTCD1G3V325 749 aa15.03■□□□□ -0
CLIP4-203ENST00000401617 SASH1O94885 1247 aa15.03■□□□□ -0
CLIP4-203ENST00000401617 REC8O95072 547 aa15.03■□□□□ -0
CLIP4-203ENST00000401617 CHMLP26374 656 aa15.03■□□□□ -0
CLIP4-203ENST00000401617 RFX5P48382 616 aaPredicted RBP15.03■□□□□ -0
CLIP4-203ENST00000401617 OS9Q13438 667 aaPredicted RBP15.03■□□□□ -0
CLIP4-203ENST00000401617 CLASRPQ8N2M8 674 aaKnown RBP15.03■□□□□ -0
CLIP4-203ENST00000401617 COPRSQ9NQ92 184 aa15.03■□□□□ -0
CLIP4-203ENST00000401617 UBE3BQ7Z3V4 1068 aa15.02■□□□□ -0
CLIP4-203ENST00000401617 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
CLIP4-203ENST00000401617 DNAJC10Q8IXB1 793 aa15.02■□□□□ -0
CLIP4-203ENST00000401617 CCDC191Q8NCU4 936 aa15.02■□□□□ -0
CLIP4-203ENST00000401617 G3BP1Q13283 466 aaKnown RBP eCLIP15.02□□□□□ -0.01
CLIP4-203ENST00000401617 NBR1Q14596 966 aa15.02□□□□□ -0.01
CLIP4-203ENST00000401617 ESYT1Q9BSJ8 1104 aa15.02□□□□□ -0.01
CLIP4-203ENST00000401617 STARD3NLO95772 234 aa15.01□□□□□ -0.01
CLIP4-203ENST00000401617 BARGINQ6ZT62 677 aa15.01□□□□□ -0.01
CLIP4-203ENST00000401617 SLC4A9Q96Q91 983 aa15.01□□□□□ -0.01
CLIP4-203ENST00000401617 ISCA1Q9BUE6 129 aa15.01□□□□□ -0.01
CLIP4-203ENST00000401617 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
CLIP4-203ENST00000401617 GLRX3O76003 335 aaKnown RBP15.01□□□□□ -0.01
CLIP4-203ENST00000401617 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
CLIP4-203ENST00000401617 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
CLIP4-203ENST00000401617 HSCBQ8IWL3 235 aa15.01□□□□□ -0.01
CLIP4-203ENST00000401617 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
CLIP4-203ENST00000401617 FOXO4P98177 505 aa15□□□□□ -0.01
CLIP4-203ENST00000401617 PTPN12Q05209 780 aaKnown RBP15□□□□□ -0.01
CLIP4-203ENST00000401617 RILPL2Q969X0 211 aa15□□□□□ -0.01
CLIP4-203ENST00000401617 EPB41L2O43491 1005 aaKnown RBP15□□□□□ -0.01
CLIP4-203ENST00000401617 CYP19A1P11511 503 aaPredicted RBP15□□□□□ -0.01
CLIP4-203ENST00000401617 DDB1Q16531 1140 aa15□□□□□ -0.01
CLIP4-203ENST00000401617 JARID2Q92833 1246 aaPredicted RBP15□□□□□ -0.01
CLIP4-203ENST00000401617 ECHDC1Q9NTX5 307 aa15□□□□□ -0.01
CLIP4-203ENST00000401617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15□□□□□ -0.01
CLIP4-203ENST00000401617 CICQ96RK0 1608 aaPredicted RBP14.99□□□□□ -0.01
CLIP4-203ENST00000401617 TCIRG1Q13488 830 aa14.99□□□□□ -0.01
CLIP4-203ENST00000401617 RABEP1Q15276 862 aa14.99□□□□□ -0.01
CLIP4-203ENST00000401617 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
CLIP4-203ENST00000401617 ZBTB3Q9H5J0 574 aa14.99□□□□□ -0.01
CLIP4-203ENST00000401617 NUTM2BA6NNL0 878 aaPredicted RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 NUTM2EB1AL46 878 aaPredicted RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 EAF2Q96CJ1 260 aaPredicted RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 IFIT2P09913 472 aaKnown RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 NFKBIBQ15653 356 aa14.98□□□□□ -0.01
CLIP4-203ENST00000401617 AACSQ86V21 672 aa14.98□□□□□ -0.01
CLIP4-203ENST00000401617 MARCH10Q8NA82 808 aaPredicted RBP14.98□□□□□ -0.01
CLIP4-203ENST00000401617 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
CLIP4-203ENST00000401617 ANKRD36CQ5JPF3 1778 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 MYT1Q01538 1121 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 CNTROBQ8N137 903 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms