RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 POTEIP0CG38 1075 aa24.73■■□□□ 1.55
COL4A2-202ENST00000400163 POTEJP0CG39 1038 aa24.73■■□□□ 1.55
COL4A2-202ENST00000400163 ST5P78524 1137 aa24.73■■□□□ 1.55
COL4A2-202ENST00000400163 PRPF40BQ6NWY9 871 aaKnown RBP24.73■■□□□ 1.55
COL4A2-202ENST00000400163 CREBZFQ9NS37 354 aa24.73■■□□□ 1.55
COL4A2-202ENST00000400163 KCNQ3O43525 872 aa24.72■■□□□ 1.55
COL4A2-202ENST00000400163 MASTLQ96GX5 879 aa24.72■■□□□ 1.55
COL4A2-202ENST00000400163 SOGA3Q5TF21 947 aa24.71■■□□□ 1.55
COL4A2-202ENST00000400163 DZIP3Q86Y13 1208 aaKnown RBP24.71■■□□□ 1.55
COL4A2-202ENST00000400163 MKRN1Q9UHC7 482 aaKnown RBP24.71■■□□□ 1.55
COL4A2-202ENST00000400163 ARFGEF2Q9Y6D5 1785 aa24.71■■□□□ 1.55
COL4A2-202ENST00000400163 BCORQ6W2J9 1755 aa24.7■■□□□ 1.55
COL4A2-202ENST00000400163 CEMIPQ8WUJ3 1361 aa24.7■■□□□ 1.55
COL4A2-202ENST00000400163 BTBD11A6QL63 1104 aa24.69■■□□□ 1.54
COL4A2-202ENST00000400163 CNGB1Q14028 1251 aaPredicted RBP24.69■■□□□ 1.54
COL4A2-202ENST00000400163 USP16Q9Y5T5 823 aa24.69■■□□□ 1.54
COL4A2-202ENST00000400163 PHACTR3Q96KR7 559 aa24.68■■□□□ 1.54
COL4A2-202ENST00000400163 PIP4K2AP48426 406 aaPredicted RBP24.67■■□□□ 1.54
COL4A2-202ENST00000400163 C7orf43Q8WVR3 580 aa24.67■■□□□ 1.54
COL4A2-202ENST00000400163 NPC1L1Q9UHC9 1359 aa24.67■■□□□ 1.54
COL4A2-202ENST00000400163 SCN4AP35499 1836 aa24.66■■□□□ 1.54
COL4A2-202ENST00000400163 IQCA1LA6NCM1 817 aa24.66■■□□□ 1.54
COL4A2-202ENST00000400163 NBPF5PQ86XG9 351 aaPredicted RBP24.66■■□□□ 1.54
COL4A2-202ENST00000400163 CLEC4GQ6UXB4 293 aa24.65■■□□□ 1.54
COL4A2-202ENST00000400163 L3MBTL3Q96JM7 780 aaPredicted RBP24.65■■□□□ 1.54
COL4A2-202ENST00000400163 PRAMEF22A3QJZ6 481 aa24.64■■□□□ 1.54
COL4A2-202ENST00000400163 PRKAR2BP31323 418 aa24.64■■□□□ 1.54
COL4A2-202ENST00000400163 CCDC93Q567U6 631 aa24.64■■□□□ 1.54
COL4A2-202ENST00000400163 LDHDQ86WU2 507 aa24.64■■□□□ 1.54
COL4A2-202ENST00000400163 TAF1DQ9H5J8 278 aaPredicted RBP24.64■■□□□ 1.54
COL4A2-202ENST00000400163 PASKQ96RG2 1323 aa24.63■■□□□ 1.53
COL4A2-202ENST00000400163 NPR1P16066 1061 aa24.62■■□□□ 1.53
COL4A2-202ENST00000400163 RSPH6AQ9H0K4 717 aa24.62■■□□□ 1.53
COL4A2-202ENST00000400163 ZNF652Q9Y2D9 606 aa24.62■■□□□ 1.53
COL4A2-202ENST00000400163 CNTNAP1P78357 1384 aa24.62■■□□□ 1.53
COL4A2-202ENST00000400163 KLRG2A4D1S0 409 aaPredicted RBP24.61■■□□□ 1.53
COL4A2-202ENST00000400163 SNRPA1P09661 255 aaKnown RBP24.61■■□□□ 1.53
COL4A2-202ENST00000400163 FKBP4Q02790 459 aaKnown RBP eCLIP24.61■■□□□ 1.53
COL4A2-202ENST00000400163 FOXN1O15353 648 aa24.6■■□□□ 1.53
COL4A2-202ENST00000400163 TPTE2Q6XPS3 522 aa24.6■■□□□ 1.53
COL4A2-202ENST00000400163 ZNF277Q9NRM2 450 aaPredicted RBP24.6■■□□□ 1.53
COL4A2-202ENST00000400163 ZNF541Q9H0D2 1346 aa24.6■■□□□ 1.53
COL4A2-202ENST00000400163 ITGBL1O95965 494 aaPredicted RBP24.59■■□□□ 1.53
COL4A2-202ENST00000400163 OLFM4Q6UX06 510 aa24.59■■□□□ 1.53
COL4A2-202ENST00000400163 NBPF26B4DH59 902 aa24.58■■□□□ 1.53
COL4A2-202ENST00000400163 EAPPQ56P03 285 aaPredicted RBP24.58■■□□□ 1.53
COL4A2-202ENST00000400163 NBPF10Q6P3W6 841 aaKnown RBP24.58■■□□□ 1.53
COL4A2-202ENST00000400163 NBPF15Q8N660 670 aa24.58■■□□□ 1.53
COL4A2-202ENST00000400163 NIP7Q9Y221 180 aaKnown RBP eCLIP24.58■■□□□ 1.53
COL4A2-202ENST00000400163 TMEM88BA6NKF7 163 aa24.57■■□□□ 1.52
COL4A2-202ENST00000400163 MCM10Q7L590 875 aa24.57■■□□□ 1.52
COL4A2-202ENST00000400163 RTKN2Q8IZC4 609 aa24.57■■□□□ 1.52
COL4A2-202ENST00000400163 CFAP53Q96M91 514 aa24.57■■□□□ 1.52
COL4A2-202ENST00000400163 HACL1Q9UJ83 578 aa24.57■■□□□ 1.52
COL4A2-202ENST00000400163 FAM177BA6PVY3 158 aa24.56■■□□□ 1.52
COL4A2-202ENST00000400163 RGL2O15211 777 aa24.56■■□□□ 1.52
COL4A2-202ENST00000400163 VEGFBP49765 207 aa24.56■■□□□ 1.52
COL4A2-202ENST00000400163 RTF1Q92541 710 aaKnown RBP24.56■■□□□ 1.52
COL4A2-202ENST00000400163 CLEC11AQ9Y240 323 aa24.56■■□□□ 1.52
COL4A2-202ENST00000400163 PRDM10Q9NQV6 1147 aa24.55■■□□□ 1.52
COL4A2-202ENST00000400163 EPHX2P34913 555 aa24.54■■□□□ 1.52
COL4A2-202ENST00000400163 NUDCQ9Y266 331 aa24.54■■□□□ 1.52
COL4A2-202ENST00000400163 ADAMTSL1Q8N6G6 1762 aa24.54■■□□□ 1.52
COL4A2-202ENST00000400163 ALDH1B1P30837 517 aa24.53■■□□□ 1.52
COL4A2-202ENST00000400163 IARSP41252 1262 aaKnown RBP24.53■■□□□ 1.52
COL4A2-202ENST00000400163 HLFQ16534 295 aa24.53■■□□□ 1.52
COL4A2-202ENST00000400163 SYNE4Q8N205 404 aa24.53■■□□□ 1.52
COL4A2-202ENST00000400163 AIDAQ96BJ3 306 aa24.53■■□□□ 1.52
COL4A2-202ENST00000400163 FZD9O00144 591 aa24.52■■□□□ 1.52
COL4A2-202ENST00000400163 U2AF1L5P0DN76 240 aaPredicted RBP24.52■■□□□ 1.52
COL4A2-202ENST00000400163 CTCFP49711 727 aaPredicted RBP24.52■■□□□ 1.52
COL4A2-202ENST00000400163 U2AF1Q01081 240 aaKnown RBP eCLIP24.52■■□□□ 1.52
COL4A2-202ENST00000400163 DCTN1Q14203 1278 aa24.52■■□□□ 1.52
COL4A2-202ENST00000400163 RNF123Q5XPI4 1314 aa24.52■■□□□ 1.52
COL4A2-202ENST00000400163 GTF2E1P29083 439 aaPredicted RBP24.51■■□□□ 1.51
COL4A2-202ENST00000400163 PNMA8AQ86V59 439 aaPredicted RBP24.51■■□□□ 1.51
COL4A2-202ENST00000400163 MAP1SQ66K74 1059 aaPredicted RBP24.5■■□□□ 1.51
COL4A2-202ENST00000400163 CNTROBQ8N137 903 aa24.5■■□□□ 1.51
COL4A2-202ENST00000400163 WBP1LQ9NX94 342 aa24.5■■□□□ 1.51
COL4A2-202ENST00000400163 HTATSF1O43719 755 aaKnown RBP24.49■■□□□ 1.51
COL4A2-202ENST00000400163 GPC2Q8N158 579 aa24.49■■□□□ 1.51
COL4A2-202ENST00000400163 SNED1Q8TER0 1413 aa24.47■■□□□ 1.51
COL4A2-202ENST00000400163 RASSF10A6NK89 507 aa24.47■■□□□ 1.51
COL4A2-202ENST00000400163 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
COL4A2-202ENST00000400163 DEFB115Q30KQ5 88 aa24.47■■□□□ 1.51
COL4A2-202ENST00000400163 CRY2Q49AN0 593 aa24.47■■□□□ 1.51
COL4A2-202ENST00000400163 JDP2Q8WYK2 163 aa24.47■■□□□ 1.51
COL4A2-202ENST00000400163 PSMD1Q99460 953 aa24.47■■□□□ 1.51
COL4A2-202ENST00000400163 LBX1P52954 281 aa24.46■■□□□ 1.51
COL4A2-202ENST00000400163 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
COL4A2-202ENST00000400163 ABCC12Q96J65 1359 aa24.45■■□□□ 1.5
COL4A2-202ENST00000400163 NUP98P52948 1817 aa24.45■■□□□ 1.5
COL4A2-202ENST00000400163 PPP2R1AP30153 589 aa24.45■■□□□ 1.5
COL4A2-202ENST00000400163 NUTM1Q86Y26 1132 aa24.45■■□□□ 1.5
COL4A2-202ENST00000400163 NGEFQ8N5V2 710 aa24.45■■□□□ 1.5
COL4A2-202ENST00000400163 NYXQ9GZU5 481 aa24.45■■□□□ 1.5
COL4A2-202ENST00000400163 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
COL4A2-202ENST00000400163 CC2D2BQ6DHV5 1058 aa24.44■■□□□ 1.5
COL4A2-202ENST00000400163 ERVV-1B6SEH8 477 aa24.43■■□□□ 1.5
COL4A2-202ENST00000400163 EIF6P56537 245 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms