RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
PTPN6-202ENST00000399448 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
PTPN6-202ENST00000399448 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
PTPN6-202ENST00000399448 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 RIC3Q7Z5B4 369 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 SUCLG2Q96I99 432 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
PTPN6-202ENST00000399448 DCCP43146 1447 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 KAZALD1Q96I82 304 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.25
PTPN6-202ENST00000399448 CRYBG1Q9Y4K1 1723 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
PTPN6-202ENST00000399448 BRD1O95696 1058 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 ABCC6O95255 1503 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 CWC27Q6UX04 472 aaKnown RBP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 IGKV5-2P06315 115 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 ZNF445P59923 1031 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 DIAPH3Q9NSV4 1193 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 COL18A1P39060 1754 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
PTPN6-202ENST00000399448 NOL8Q76FK4 1167 aaKnown RBP16.56■□□□□ 0.24
PTPN6-202ENST00000399448 AACSQ86V21 672 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 MEGF6O75095 1541 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 SASH1O94885 1247 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 SNRPA1P09661 255 aaKnown RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 MYL6BP14649 208 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 CAVIN1Q6NZI2 390 aaKnown RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 GCKRQ14397 625 aa16.54■□□□□ 0.24
PTPN6-202ENST00000399448 TTC14Q96N46 770 aa16.54■□□□□ 0.24
PTPN6-202ENST00000399448 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
PTPN6-202ENST00000399448 C5P01031 1676 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-202ENST00000399448 HIP1O00291 1037 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 CYP27B1O15528 508 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 FOXD4L5Q5VV16 416 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-202ENST00000399448 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 FOXD4L4Q8WXT5 416 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-202ENST00000399448 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 MYD88Q99836 296 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 MRC1P22897 1456 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 CHRNA2Q15822 529 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 LRP10Q7Z4F1 713 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 KCNB2Q92953 911 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 SPATA31A3Q5VYP0 1347 aa16.52■□□□□ 0.23
PTPN6-202ENST00000399448 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
PTPN6-202ENST00000399448 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
PTPN6-202ENST00000399448 CPDO75976 1380 aa16.51■□□□□ 0.23
PTPN6-202ENST00000399448 MBD3O95983 291 aa16.51■□□□□ 0.23
PTPN6-202ENST00000399448 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
PTPN6-202ENST00000399448 AK2P54819 239 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 PTH1RQ03431 593 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 TM6SF1Q9BZW5 370 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
PTPN6-202ENST00000399448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
PTPN6-202ENST00000399448 STRCP1A6NGW2 1772 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 CABP4P57796 275 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
PTPN6-202ENST00000399448 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
PTPN6-202ENST00000399448 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 SIL1Q9H173 461 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 PPP1R9BQ96SB3 815 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 ZSWIM6Q9HCJ5 1215 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms