RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
LINC00243-201ENST00000399196 GSPT1P15170 499 aaKnown RBP11.73□□□□□ -0.53
LINC00243-201ENST00000399196 NBR1Q14596 966 aa11.73□□□□□ -0.53
LINC00243-201ENST00000399196 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
LINC00243-201ENST00000399196 KSR2Q6VAB6 950 aa11.73□□□□□ -0.53
LINC00243-201ENST00000399196 SEPT12Q8IYM1 358 aa11.73□□□□□ -0.53
LINC00243-201ENST00000399196 MAP3K2Q9Y2U5 619 aa11.73□□□□□ -0.53
LINC00243-201ENST00000399196 HMMRO75330 724 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 UBTFL1P0CB47 393 aaPredicted RBP11.72□□□□□ -0.53
LINC00243-201ENST00000399196 BMP2KLQ5H9B9 411 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 ITGB4P16144 1822 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
LINC00243-201ENST00000399196 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 PIGBQ92521 554 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 TBC1D32Q96NH3 1257 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 EXOC6BQ9Y2D4 811 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 EP400Q96L91 3159 aa11.72□□□□□ -0.53
LINC00243-201ENST00000399196 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
LINC00243-201ENST00000399196 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.53
LINC00243-201ENST00000399196 COPS6Q7L5N1 327 aa11.71□□□□□ -0.54
LINC00243-201ENST00000399196 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.54
LINC00243-201ENST00000399196 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.54
LINC00243-201ENST00000399196 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
LINC00243-201ENST00000399196 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
LINC00243-201ENST00000399196 NEXNQ0ZGT2 675 aa11.7□□□□□ -0.54
LINC00243-201ENST00000399196 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
LINC00243-201ENST00000399196 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
LINC00243-201ENST00000399196 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
LINC00243-201ENST00000399196 PRIM1P49642 420 aaKnown RBP11.69□□□□□ -0.54
LINC00243-201ENST00000399196 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 C9orf78Q9NZ63 289 aaPredicted RBP11.69□□□□□ -0.54
LINC00243-201ENST00000399196 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 PTF1AQ7RTS3 328 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 LINS1Q8NG48 757 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 ATG3Q9NT62 314 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
LINC00243-201ENST00000399196 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 BCL9O00512 1426 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 TTC22Q5TAA0 569 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 PPP1R42Q7Z4L9 355 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
LINC00243-201ENST00000399196 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
LINC00243-201ENST00000399196 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
LINC00243-201ENST00000399196 KCNQ2O43526 872 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 A1BGP04217 495 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 RXRBP28702 533 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 POLA2Q14181 598 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 STARD3NLO95772 234 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 IGKV5-2P06315 115 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 KAZALD1Q96I82 304 aa11.67□□□□□ -0.54
LINC00243-201ENST00000399196 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
LINC00243-201ENST00000399196 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 MYD88Q99836 296 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 METTL22Q9BUU2 404 aaPredicted RBP11.66□□□□□ -0.54
LINC00243-201ENST00000399196 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
LINC00243-201ENST00000399196 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 PLBD2Q8NHP8 589 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 C22orf23Q9BZE7 217 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
LINC00243-201ENST00000399196 PDE1AP54750 535 aa11.65□□□□□ -0.54
LINC00243-201ENST00000399196 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
LINC00243-201ENST00000399196 GRM8O00222 908 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 SDSP20132 328 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 KRT27Q7Z3Y8 459 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 NEURL1BA8MQ27 555 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 SUCLG2Q96I99 432 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
LINC00243-201ENST00000399196 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 UTYO14607 1347 aa11.64□□□□□ -0.55
LINC00243-201ENST00000399196 BTAF1O14981 1849 aa11.63□□□□□ -0.55
LINC00243-201ENST00000399196 KIF2CQ99661 725 aa11.63□□□□□ -0.55
LINC00243-201ENST00000399196 SURF6O75683 361 aaKnown RBP11.63□□□□□ -0.55
LINC00243-201ENST00000399196 MTX1Q13505 466 aa11.63□□□□□ -0.55
LINC00243-201ENST00000399196 GCKRQ14397 625 aa11.63□□□□□ -0.55
LINC00243-201ENST00000399196 TTLL7Q6ZT98 887 aa11.63□□□□□ -0.55
LINC00243-201ENST00000399196 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
LINC00243-201ENST00000399196 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
LINC00243-201ENST00000399196 ATP5J2-PTCD1G3V325 749 aa11.62□□□□□ -0.55
LINC00243-201ENST00000399196 CDC45O75419 566 aa11.62□□□□□ -0.55
LINC00243-201ENST00000399196 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
LINC00243-201ENST00000399196 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
LINC00243-201ENST00000399196 JARID2Q92833 1246 aaPredicted RBP11.62□□□□□ -0.55
LINC00243-201ENST00000399196 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
LINC00243-201ENST00000399196 PA2G4Q9UQ80 394 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms