RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 SMCR8Q8TEV9 937 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 ZNF213O14771 459 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 CBFA2T2O43439 604 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 NFE2L2Q16236 605 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 IMPG2Q9BZV3 1241 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 CALM1P0DP23 149 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 CALM2P0DP24 149 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 CALM3P0DP25 149 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 BACH1O14867 736 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 GABPAQ06546 454 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 M0QZ92 97 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
SLC38A1-201ENST00000398637 IDEP14735 1019 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 RNF34Q969K3 372 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 SMARCC2Q8TAQ2 1214 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 ZGPATQ8N5A5 531 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-201ENST00000398637 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.314e-7■■■■□ 24.2
SLC38A1-201ENST00000398637 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.318e-9■■■□□ 15.8
SLC38A1-201ENST00000398637 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 KRT32Q14532 448 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 IFFO1Q0D2I5 559 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
SLC38A1-201ENST00000398637 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 NIP7Q9Y221 180 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 APBA3O96018 575 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 USP37Q86T82 979 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 EYA3Q99504 573 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 MCM2P49736 904 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 NAIPQ13075 1403 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 LUZP1Q86V48 1076 aa13.13□□□□□ -0.31
SLC38A1-201ENST00000398637 KRT85P78386 507 aa13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 ERMNQ8TAM6 284 aa13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 RAB3GAP1Q15042 981 aa13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 TRAF1Q13077 416 aa13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 AMPD3Q01432 767 aa13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 CFAP58Q5T655 872 aa13.12□□□□□ -0.31
SLC38A1-201ENST00000398637 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 ERLIN1O75477 346 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 PSMC4P43686 418 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 GAS8O95995 478 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 PDE4AP27815 886 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 TSPY26PQ9H489 355 aa13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
SLC38A1-201ENST00000398637 GJC1P36383 396 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms