RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
RAB1A-201ENST00000398529 DZIP3Q86Y13 1208 aaKnown RBP19.16■□□□□ 0.66
RAB1A-201ENST00000398529 COL11A2P13942 1736 aaPredicted RBP19.15■□□□□ 0.66
RAB1A-201ENST00000398529 DDNO94850 711 aaPredicted RBP19.15■□□□□ 0.66
RAB1A-201ENST00000398529 SRGNP10124 158 aa19.15■□□□□ 0.66
RAB1A-201ENST00000398529 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
RAB1A-201ENST00000398529 NBPF5PQ86XG9 351 aaPredicted RBP19.15■□□□□ 0.66
RAB1A-201ENST00000398529 MKRN1Q9UHC7 482 aaKnown RBP19.15■□□□□ 0.66
RAB1A-201ENST00000398529 SLX4Q8IY92 1834 aa19.14■□□□□ 0.65
RAB1A-201ENST00000398529 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
RAB1A-201ENST00000398529 CAMTA2O94983 1202 aa19.13■□□□□ 0.65
RAB1A-201ENST00000398529 CCDC93Q567U6 631 aa19.13■□□□□ 0.65
RAB1A-201ENST00000398529 CLEC4GQ6UXB4 293 aa19.13■□□□□ 0.65
RAB1A-201ENST00000398529 SIPA1L3O60292 1781 aaPredicted RBP19.13■□□□□ 0.65
RAB1A-201ENST00000398529 PER1O15534 1290 aaPredicted RBP19.12■□□□□ 0.65
RAB1A-201ENST00000398529 TPTE2Q6XPS3 522 aa19.12■□□□□ 0.65
RAB1A-201ENST00000398529 LDHDQ86WU2 507 aa19.12■□□□□ 0.65
RAB1A-201ENST00000398529 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
RAB1A-201ENST00000398529 AIDAQ96BJ3 306 aa19.12■□□□□ 0.65
RAB1A-201ENST00000398529 SCN4AP35499 1836 aa19.11■□□□□ 0.65
RAB1A-201ENST00000398529 ARFGEF2Q9Y6D5 1785 aa19.11■□□□□ 0.65
RAB1A-201ENST00000398529 NPR1P16066 1061 aa19.11■□□□□ 0.65
RAB1A-201ENST00000398529 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
RAB1A-201ENST00000398529 NUDCQ9Y266 331 aa19.11■□□□□ 0.65
RAB1A-201ENST00000398529 GTF2E1P29083 439 aaPredicted RBP19.1■□□□□ 0.65
RAB1A-201ENST00000398529 RTKN2Q8IZC4 609 aa19.1■□□□□ 0.65
RAB1A-201ENST00000398529 SNRPA1P09661 255 aaKnown RBP19.09■□□□□ 0.65
RAB1A-201ENST00000398529 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
RAB1A-201ENST00000398529 BCORQ6W2J9 1755 aa19.09■□□□□ 0.65
RAB1A-201ENST00000398529 ALDH1B1P30837 517 aa19.08■□□□□ 0.64
RAB1A-201ENST00000398529 PRKAR2BP31323 418 aa19.08■□□□□ 0.64
RAB1A-201ENST00000398529 L3MBTL3Q96JM7 780 aaPredicted RBP19.08■□□□□ 0.64
RAB1A-201ENST00000398529 TAF1DQ9H5J8 278 aaPredicted RBP19.08■□□□□ 0.64
RAB1A-201ENST00000398529 CEMIPQ8WUJ3 1361 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 TMEM88BA6NKF7 163 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 POTEIP0CG38 1075 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 POTEJP0CG39 1038 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 FKBP4Q02790 459 aaKnown RBP eCLIP19.07■□□□□ 0.64
RAB1A-201ENST00000398529 HACL1Q9UJ83 578 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 NIP7Q9Y221 180 aaKnown RBP eCLIP19.07■□□□□ 0.64
RAB1A-201ENST00000398529 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
RAB1A-201ENST00000398529 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
RAB1A-201ENST00000398529 KCNQ3O43525 872 aa19.06■□□□□ 0.64
RAB1A-201ENST00000398529 PNMA8AQ86V59 439 aaPredicted RBP19.06■□□□□ 0.64
RAB1A-201ENST00000398529 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
RAB1A-201ENST00000398529 RGL2O15211 777 aa19.05■□□□□ 0.64
RAB1A-201ENST00000398529 PIP4K2AP48426 406 aaPredicted RBP19.05■□□□□ 0.64
RAB1A-201ENST00000398529 CTCFP49711 727 aaPredicted RBP19.05■□□□□ 0.64
RAB1A-201ENST00000398529 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
RAB1A-201ENST00000398529 ZNF277Q9NRM2 450 aaPredicted RBP19.05■□□□□ 0.64
RAB1A-201ENST00000398529 FAM177BA6PVY3 158 aa19.04■□□□□ 0.64
RAB1A-201ENST00000398529 EPHX2P34913 555 aa19.04■□□□□ 0.64
RAB1A-201ENST00000398529 C7orf43Q8WVR3 580 aa19.04■□□□□ 0.64
RAB1A-201ENST00000398529 JDP2Q8WYK2 163 aa19.04■□□□□ 0.64
RAB1A-201ENST00000398529 PRDM10Q9NQV6 1147 aa19.04■□□□□ 0.64
RAB1A-201ENST00000398529 PASKQ96RG2 1323 aa19.03■□□□□ 0.64
RAB1A-201ENST00000398529 FOXN1O15353 648 aa19.03■□□□□ 0.64
RAB1A-201ENST00000398529 U2AF1L5P0DN76 240 aaPredicted RBP19.03■□□□□ 0.64
RAB1A-201ENST00000398529 U2AF1Q01081 240 aaKnown RBP eCLIP19.03■□□□□ 0.64
RAB1A-201ENST00000398529 NEFMP07197 916 aa19.02■□□□□ 0.64
RAB1A-201ENST00000398529 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
RAB1A-201ENST00000398529 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
RAB1A-201ENST00000398529 KLRG2A4D1S0 409 aaPredicted RBP19.01■□□□□ 0.63
RAB1A-201ENST00000398529 ZNF316A6NFI3 1004 aaPredicted RBP19.01■□□□□ 0.63
RAB1A-201ENST00000398529 IARSP41252 1262 aaKnown RBP19.01■□□□□ 0.63
RAB1A-201ENST00000398529 VEGFBP49765 207 aa19.01■□□□□ 0.63
RAB1A-201ENST00000398529 MCM10Q7L590 875 aa19.01■□□□□ 0.63
RAB1A-201ENST00000398529 SYNE4Q8N205 404 aa19.01■□□□□ 0.63
RAB1A-201ENST00000398529 ZNF541Q9H0D2 1346 aa19■□□□□ 0.63
RAB1A-201ENST00000398529 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
RAB1A-201ENST00000398529 HTATSF1O43719 755 aaKnown RBP19■□□□□ 0.63
RAB1A-201ENST00000398529 ITGBL1O95965 494 aaPredicted RBP19■□□□□ 0.63
RAB1A-201ENST00000398529 LMOD1P29536 600 aaPredicted RBP19■□□□□ 0.63
RAB1A-201ENST00000398529 EIF6P56537 245 aaKnown RBP19■□□□□ 0.63
RAB1A-201ENST00000398529 DEFB115Q30KQ5 88 aa19■□□□□ 0.63
RAB1A-201ENST00000398529 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
RAB1A-201ENST00000398529 CNTROBQ8N137 903 aa19■□□□□ 0.63
RAB1A-201ENST00000398529 GPC2Q8N158 579 aa19■□□□□ 0.63
RAB1A-201ENST00000398529 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
RAB1A-201ENST00000398529 TMX4Q9H1E5 349 aaPredicted RBP18.99■□□□□ 0.63
RAB1A-201ENST00000398529 ABT1Q9ULW3 272 aaKnown RBP18.99■□□□□ 0.63
RAB1A-201ENST00000398529 GRIPAP1Q4V328 841 aa18.98■□□□□ 0.63
RAB1A-201ENST00000398529 RPGRQ92834 1020 aaKnown RBP18.98■□□□□ 0.63
RAB1A-201ENST00000398529 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
RAB1A-201ENST00000398529 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 FZD9O00144 591 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 MAP2K1Q02750 393 aaPredicted RBP18.97■□□□□ 0.63
RAB1A-201ENST00000398529 MAP1SQ66K74 1059 aaPredicted RBP18.97■□□□□ 0.63
RAB1A-201ENST00000398529 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
RAB1A-201ENST00000398529 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 KIF6Q6ZMV9 814 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 PSMD1Q99460 953 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 GJA3Q9Y6H8 435 aa18.97■□□□□ 0.63
RAB1A-201ENST00000398529 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
RAB1A-201ENST00000398529 PNISRQ8TF01 805 aaKnown RBP18.96■□□□□ 0.63
RAB1A-201ENST00000398529 BEGAINQ9BUH8 593 aa18.96■□□□□ 0.63
RAB1A-201ENST00000398529 WBP1LQ9NX94 342 aa18.96■□□□□ 0.63
RAB1A-201ENST00000398529 LBX1P52954 281 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms