RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 ABCC10Q5T3U5 1492 aa14.55□□□□□ -0.08
SOCS6-201ENST00000397942 SNRPA1P09661 255 aaKnown RBP14.55□□□□□ -0.08
SOCS6-201ENST00000397942 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
SOCS6-201ENST00000397942 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
SOCS6-201ENST00000397942 LRRC2Q9BYS8 371 aa14.55□□□□□ -0.08
SOCS6-201ENST00000397942 PHAXQ9H814 394 aaKnown RBP14.55□□□□□ -0.08
SOCS6-201ENST00000397942 SOS1Q07889 1333 aaPredicted RBP14.55□□□□□ -0.08
SOCS6-201ENST00000397942 FLT4P35916 1363 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 ZNF521Q96K83 1311 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 UBXN4Q92575 508 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 ORC3Q9UBD5 711 aaPredicted RBP14.54□□□□□ -0.08
SOCS6-201ENST00000397942 TRMT2AQ8IZ69 625 aaKnown RBP14.54□□□□□ -0.08
SOCS6-201ENST00000397942 SMARCE1Q969G3 411 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 C16orf45Q96MC5 204 aaPredicted RBP14.54□□□□□ -0.08
SOCS6-201ENST00000397942 TNRQ92752 1358 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 SMTNL1A8MU46 457 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 GPTP24298 496 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
SOCS6-201ENST00000397942 CNPY2Q9Y2B0 182 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 USP16Q9Y5T5 823 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
SOCS6-201ENST00000397942 HMG20BQ9P0W2 317 aa14.54□□□□□ -0.08
SOCS6-201ENST00000397942 MINDY4BA8MYZ0 360 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 DNM1Q05193 864 aaKnown RBP14.53□□□□□ -0.08
SOCS6-201ENST00000397942 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
SOCS6-201ENST00000397942 INTS4Q96HW7 963 aaKnown RBP14.53□□□□□ -0.08
SOCS6-201ENST00000397942 ACBD3Q9H3P7 528 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 BIN1O00499 593 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 CTAGE5O15320 804 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 TTC12Q9H892 705 aaPredicted RBP14.53□□□□□ -0.08
SOCS6-201ENST00000397942 DACT1Q9NYF0 836 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 CLIP2Q9UDT6 1046 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 LRRC59Q96AG4 307 aaKnown RBP14.53□□□□□ -0.08
SOCS6-201ENST00000397942 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
SOCS6-201ENST00000397942 DACH1Q9UI36 760 aa14.53□□□□□ -0.08
SOCS6-201ENST00000397942 GOLGA8BA8MQT2 603 aa14.52□□□□□ -0.08
SOCS6-201ENST00000397942 YTHDC2Q9H6S0 1430 aaKnown RBP14.52□□□□□ -0.08
SOCS6-201ENST00000397942 CBFA2T2O43439 604 aa14.52□□□□□ -0.08
SOCS6-201ENST00000397942 KIF18AQ8NI77 898 aa14.52□□□□□ -0.08
SOCS6-201ENST00000397942 ZKSCAN5Q9Y2L8 839 aa14.52□□□□□ -0.08
SOCS6-201ENST00000397942 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.09
SOCS6-201ENST00000397942 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
SOCS6-201ENST00000397942 PIBF1Q8WXW3 757 aa14.52□□□□□ -0.09
SOCS6-201ENST00000397942 NOL7Q9UMY1 257 aaKnown RBP14.52□□□□□ -0.09
SOCS6-201ENST00000397942 NPHP3Q7Z494 1330 aa14.52□□□□□ -0.09
SOCS6-201ENST00000397942 UVSSAQ2YD98 709 aa14.52□□□□□ -0.09
SOCS6-201ENST00000397942 ZNF830Q96NB3 372 aaPredicted RBP14.52□□□□□ -0.09
SOCS6-201ENST00000397942 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.09
SOCS6-201ENST00000397942 IGHMBP2P38935 993 aaKnown RBP14.51□□□□□ -0.09
SOCS6-201ENST00000397942 PDCL3Q9H2J4 239 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 TRMT1Q9NXH9 659 aaKnown RBP14.51□□□□□ -0.09
SOCS6-201ENST00000397942 CAVIN2O95810 425 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 SYT1P21579 422 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 AK2P54819 239 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 MBD5Q9P267 1494 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 CCDC196A0A1B0GTZ2 297 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 TNNT1P13805 278 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 ZNHIT6Q9NWK9 470 aaKnown RBP14.51□□□□□ -0.09
SOCS6-201ENST00000397942 WASF1Q92558 559 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 SBNO2Q9Y2G9 1366 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 CPA1P15085 419 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 KLHL10Q6JEL2 608 aa14.51□□□□□ -0.09
SOCS6-201ENST00000397942 CWC25Q9NXE8 425 aaPredicted RBP14.5□□□□□ -0.09
SOCS6-201ENST00000397942 KCNA6P17658 529 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 IKQ13123 557 aaPredicted RBP14.5□□□□□ -0.09
SOCS6-201ENST00000397942 AKAP4Q5JQC9 854 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 RUFY1Q96T51 708 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 F13A1P00488 732 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 RAB11FIP4Q86YS3 637 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 CAGE1Q8TC20 777 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 FAM200AQ8TCP9 573 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 MAGEC2Q9UBF1 373 aaPredicted RBP14.5□□□□□ -0.09
SOCS6-201ENST00000397942 MAGI2Q86UL8 1455 aa14.5□□□□□ -0.09
SOCS6-201ENST00000397942 KIF2AO00139 706 aaPredicted RBP14.5□□□□□ -0.09
SOCS6-201ENST00000397942 IFIT3O14879 490 aaKnown RBP14.5□□□□□ -0.09
SOCS6-201ENST00000397942 GCP02774 474 aa14.49□□□□□ -0.09
SOCS6-201ENST00000397942 STIM1Q13586 685 aa14.49□□□□□ -0.09
SOCS6-201ENST00000397942 CDK5RAP3Q96JB5 506 aa14.49□□□□□ -0.09
SOCS6-201ENST00000397942 ZSCAN16Q9H4T2 348 aaPredicted RBP14.49□□□□□ -0.09
SOCS6-201ENST00000397942 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
SOCS6-201ENST00000397942 EIF2AK4Q9P2K8 1649 aaKnown RBP14.48□□□□□ -0.09
SOCS6-201ENST00000397942 IARSP41252 1262 aaKnown RBP14.48□□□□□ -0.09
SOCS6-201ENST00000397942 ARHGAP29Q52LW3 1261 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 ATP2B2Q01814 1243 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 BICDL1Q6ZP65 573 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 TCEAL9Q9UHQ7 104 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 TBX22Q9Y458 520 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 TTC41PQ6P2S7 1318 aa14.48□□□□□ -0.09
SOCS6-201ENST00000397942 CCDC43Q96MW1 224 aaKnown RBP14.47□□□□□ -0.09
SOCS6-201ENST00000397942 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
SOCS6-201ENST00000397942 URI1O94763 535 aaPredicted RBP14.47□□□□□ -0.09
SOCS6-201ENST00000397942 CCAR1Q8IX12 1150 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms