RNA–Protein interactions for RNA: ENST00000397176.6

PRKCQ-202, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-202ENST00000397176 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
PRKCQ-202ENST00000397176 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
PRKCQ-202ENST00000397176 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
PRKCQ-202ENST00000397176 HOMER1Q86YM7 354 aa13.36□□□□□ -0.27
PRKCQ-202ENST00000397176 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 OAS2P29728 719 aaKnown RBP13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 CCZ1BP86790 482 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 CCZ1P86791 482 aaPredicted RBP13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 C11orf57Q6ZUT1 292 aaPredicted RBP13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 UBXN4Q92575 508 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 EMILIN1Q9Y6C2 1016 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 NOP2P46087 812 aaKnown RBP13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 LMAN1P49257 510 aa13.35□□□□□ -0.27
PRKCQ-202ENST00000397176 FAM193AP78312 1265 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 ERCC4Q92889 916 aaPredicted RBP13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 CASQ1P31415 396 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 GPS2Q13227 327 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 RNF20Q5VTR2 975 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 GPATCH11Q8N954 259 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 TCEANC2Q96MN5 208 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 PDRG1Q9NUG6 133 aa13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
PRKCQ-202ENST00000397176 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.27
PRKCQ-202ENST00000397176 G2E3Q7L622 706 aa13.33□□□□□ -0.27
PRKCQ-202ENST00000397176 CLSTN2Q9H4D0 955 aa13.33□□□□□ -0.27
PRKCQ-202ENST00000397176 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
PRKCQ-202ENST00000397176 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
PRKCQ-202ENST00000397176 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
PRKCQ-202ENST00000397176 HYPKQ9NX55 129 aa13.33□□□□□ -0.28
PRKCQ-202ENST00000397176 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRKCQ-202ENST00000397176 ME3Q16798 604 aa13.33□□□□□ -0.28
PRKCQ-202ENST00000397176 SOX12O15370 315 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 GNL2Q13823 731 aaKnown RBP13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 MCM10Q7L590 875 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 DDX19AQ9NUU7 478 aaKnown RBP13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 DNAI1Q9UI46 699 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 PLCH2O75038 1416 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 NEMFO60524 1076 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 GNAI2P04899 355 aa13.32□□□□□ -0.28
PRKCQ-202ENST00000397176 ANKRD65E5RJM6 399 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 STK3Q13188 491 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 RRP15Q9Y3B9 282 aaKnown RBP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 SASH3O75995 380 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 ICE2Q659A1 982 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 SMC1AQ14683 1233 aaKnown RBP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 E4F1Q66K89 784 aaPredicted RBP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 PPP1R13BQ96KQ4 1090 aa13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 CWC15Q9P013 229 aaKnown RBP13.31□□□□□ -0.28
PRKCQ-202ENST00000397176 SSH2Q76I76 1423 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 SGSM2O43147 1006 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 FOSBP53539 338 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 DDX11Q96FC9 970 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 ORC3Q9UBD5 711 aaPredicted RBP13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 IQCB1Q15051 598 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 PGBD1Q96JS3 809 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
PRKCQ-202ENST00000397176 NPHP3Q7Z494 1330 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 APPP05067 770 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 IFIT2P09913 472 aaKnown RBP13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 CDC25BP30305 580 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 SRLQ86TD4 932 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 MRFAP1L1Q96HT8 127 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 USP32Q8NFA0 1604 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 RIMS2Q9UQ26 1411 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 SMC2O95347 1197 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 COL9A3Q14050 684 aaPredicted RBP13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 LARP1Q6PKG0 1096 aaKnown RBP13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 YEATS2Q9ULM3 1422 aa13.29□□□□□ -0.28
PRKCQ-202ENST00000397176 KIF2AO00139 706 aaPredicted RBP13.28□□□□□ -0.28
PRKCQ-202ENST00000397176 AOPEPQ8N6M6 819 aa13.28□□□□□ -0.28
PRKCQ-202ENST00000397176 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
PRKCQ-202ENST00000397176 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
PRKCQ-202ENST00000397176 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms