RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 TBC1D32Q96NH3 1257 aa14.38□□□□□ -0.11
ATN1-202ENST00000396684 BOLA2Q9H3K6 86 aa14.38□□□□□ -0.11
ATN1-202ENST00000396684 PA2G4Q9UQ80 394 aaKnown RBP14.38□□□□□ -0.11
ATN1-202ENST00000396684 SOS2Q07890 1332 aaPredicted RBP14.38□□□□□ -0.11
ATN1-202ENST00000396684 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
ATN1-202ENST00000396684 PNMA6EA0A0J9YXQ4 647 aa14.37□□□□□ -0.11
ATN1-202ENST00000396684 METTL24Q5JXM2 366 aa14.37□□□□□ -0.11
ATN1-202ENST00000396684 PROSER3Q2NL68 480 aa14.37□□□□□ -0.11
ATN1-202ENST00000396684 APPP05067 770 aa14.37□□□□□ -0.11
ATN1-202ENST00000396684 AKAP2Q9Y2D5 859 aa14.37□□□□□ -0.11
ATN1-202ENST00000396684 PRAMEF22A3QJZ6 481 aa14.36□□□□□ -0.11
ATN1-202ENST00000396684 FAM98CQ17RN3 349 aaKnown RBP14.36□□□□□ -0.11
ATN1-202ENST00000396684 BEND3Q5T5X7 828 aa14.36□□□□□ -0.11
ATN1-202ENST00000396684 BICC1Q9H694 974 aaKnown RBP14.36□□□□□ -0.11
ATN1-202ENST00000396684 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
ATN1-202ENST00000396684 ZPR1O75312 459 aa14.36□□□□□ -0.11
ATN1-202ENST00000396684 TOMM22Q9NS69 142 aa14.36□□□□□ -0.11
ATN1-202ENST00000396684 TBC1D2BQ9UPU7 963 aa14.36□□□□□ -0.11
ATN1-202ENST00000396684 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
ATN1-202ENST00000396684 ANKRD18BA2A2Z9 1011 aa14.35□□□□□ -0.11
ATN1-202ENST00000396684 G3V3G9 751 aa14.35□□□□□ -0.11
ATN1-202ENST00000396684 MCM2P49736 904 aa14.35□□□□□ -0.11
ATN1-202ENST00000396684 GCKRQ14397 625 aa14.35□□□□□ -0.11
ATN1-202ENST00000396684 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
ATN1-202ENST00000396684 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
ATN1-202ENST00000396684 IGHMBP2P38935 993 aaKnown RBP14.35□□□□□ -0.11
ATN1-202ENST00000396684 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
ATN1-202ENST00000396684 FMN2Q9NZ56 1722 aa14.35□□□□□ -0.11
ATN1-202ENST00000396684 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
ATN1-202ENST00000396684 PSMA5P28066 241 aa14.34□□□□□ -0.11
ATN1-202ENST00000396684 LDHAL6AQ6ZMR3 332 aa14.33□□□□□ -0.11
ATN1-202ENST00000396684 OTUD7AQ8TE49 926 aaPredicted RBP14.33□□□□□ -0.11
ATN1-202ENST00000396684 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
ATN1-202ENST00000396684 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
ATN1-202ENST00000396684 SUCLG2Q96I99 432 aa14.33□□□□□ -0.12
ATN1-202ENST00000396684 USP21Q9UK80 565 aa14.33□□□□□ -0.12
ATN1-202ENST00000396684 NEURL1BA8MQ27 555 aa14.33□□□□□ -0.12
ATN1-202ENST00000396684 K7ELQ4 463 aaPredicted RBP14.33□□□□□ -0.12
ATN1-202ENST00000396684 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.12
ATN1-202ENST00000396684 CCDC191Q8NCU4 936 aa14.33□□□□□ -0.12
ATN1-202ENST00000396684 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
ATN1-202ENST00000396684 DDX11L8A8MPP1 907 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■■□□ 15.7
ATN1-202ENST00000396684 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 SEC24BO95487 1268 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 IFIT1P09914 478 aaKnown RBP14.32□□□□□ -0.12
ATN1-202ENST00000396684 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 KIF3AQ9Y496 699 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 SETD1AO15047 1707 aaKnown RBP14.32□□□□□ -0.12
ATN1-202ENST00000396684 NUCB2P80303 420 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 TRDNQ13061 729 aa14.32□□□□□ -0.12
ATN1-202ENST00000396684 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
ATN1-202ENST00000396684 CPDO75976 1380 aa14.31□□□□□ -0.12
ATN1-202ENST00000396684 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
ATN1-202ENST00000396684 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
ATN1-202ENST00000396684 CEMIPQ8WUJ3 1361 aa14.31□□□□□ -0.12
ATN1-202ENST00000396684 HEG1Q9ULI3 1381 aa14.31□□□□□ -0.12
ATN1-202ENST00000396684 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 CHMP4CQ96CF2 233 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 TTC41PQ6P2S7 1318 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 TTLL7Q6ZT98 887 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 AK7Q96M32 723 aa14.3□□□□□ -0.12
ATN1-202ENST00000396684 TBC1D2Q9BYX2 928 aa14.29□□□□□ -0.12
ATN1-202ENST00000396684 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.12
ATN1-202ENST00000396684 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
ATN1-202ENST00000396684 RALYLQ86SE5 291 aaKnown RBP14.29□□□□□ -0.12
ATN1-202ENST00000396684 SMC3Q9UQE7 1217 aa14.29□□□□□ -0.12
ATN1-202ENST00000396684 CYP46A1Q9Y6A2 500 aa14.29□□□□□ -0.12
ATN1-202ENST00000396684 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
ATN1-202ENST00000396684 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
ATN1-202ENST00000396684 ZNF142P52746 1687 aaPredicted RBP14.28□□□□□ -0.12
ATN1-202ENST00000396684 GNL2Q13823 731 aaKnown RBP14.28□□□□□ -0.12
ATN1-202ENST00000396684 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
ATN1-202ENST00000396684 DEKP35659 375 aaKnown RBP14.28□□□□□ -0.12
ATN1-202ENST00000396684 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
ATN1-202ENST00000396684 THRAP3Q9Y2W1 955 aaKnown RBP14.28□□□□□ -0.12
ATN1-202ENST00000396684 IRS4O14654 1257 aaPredicted RBP14.28□□□□□ -0.12
ATN1-202ENST00000396684 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
ATN1-202ENST00000396684 CCDC87Q9NVE4 849 aa14.28□□□□□ -0.12
ATN1-202ENST00000396684 PIGBQ92521 554 aa14.27□□□□□ -0.12
ATN1-202ENST00000396684 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.12
ATN1-202ENST00000396684 ATP6V1DQ9Y5K8 247 aa14.27□□□□□ -0.12
ATN1-202ENST00000396684 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.12
ATN1-202ENST00000396684 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
ATN1-202ENST00000396684 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.13
ATN1-202ENST00000396684 PIK3C2AO00443 1686 aa14.27□□□□□ -0.13
ATN1-202ENST00000396684 RFC4P35249 363 aa14.27□□□□□ -0.13
ATN1-202ENST00000396684 JAKMIP1Q96N16 626 aaKnown RBP14.27□□□□□ -0.13
ATN1-202ENST00000396684 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.13
ATN1-202ENST00000396684 UPF3BQ9BZI7 483 aaKnown RBP14.27□□□□□ -0.13
ATN1-202ENST00000396684 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
ATN1-202ENST00000396684 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
ATN1-202ENST00000396684 CCDC152Q4G0S7 254 aa14.26□□□□□ -0.13
ATN1-202ENST00000396684 IDH1O75874 414 aaKnown RBP14.26□□□□□ -0.13
ATN1-202ENST00000396684 PHF14O94880 888 aa14.26□□□□□ -0.13
ATN1-202ENST00000396684 TFCP2Q12800 502 aa14.26□□□□□ -0.13
ATN1-202ENST00000396684 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms