RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MCM10Q7L590 875 aa18.21■□□□□ 0.5
GNE-202ENST00000396594 SLC12A7Q9Y666 1083 aa18.21■□□□□ 0.5
GNE-202ENST00000396594 GNAT2P19087 354 aa18.2■□□□□ 0.5
GNE-202ENST00000396594 C19orf44Q9H6X5 657 aa18.2■□□□□ 0.5
GNE-202ENST00000396594 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
GNE-202ENST00000396594 CCDC181Q5TID7 509 aa18.2■□□□□ 0.5
GNE-202ENST00000396594 CCDC183Q5T5S1 534 aa18.2■□□□□ 0.5
GNE-202ENST00000396594 ZSCAN16Q9H4T2 348 aaPredicted RBP18.2■□□□□ 0.5
GNE-202ENST00000396594 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
GNE-202ENST00000396594 EMILIN1Q9Y6C2 1016 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 RAD50Q92878 1312 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 DISP3Q9P2K9 1392 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 PLCG2P16885 1265 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
GNE-202ENST00000396594 PDE4CQ08493 712 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 ZNF771Q7L3S4 317 aaPredicted RBP18.19■□□□□ 0.5
GNE-202ENST00000396594 CCDC66A2RUB6 948 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 GOLGA6L9A6NEM1 432 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 C8orf76Q96K31 380 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
GNE-202ENST00000396594 TTC41PQ6P2S7 1318 aa18.19■□□□□ 0.5
GNE-202ENST00000396594 NGLY1Q96IV0 654 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 B4DLN1 442 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
GNE-202ENST00000396594 CABP5Q9NP86 173 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 MCM4P33991 863 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 CCDC150Q8NCX0 1101 aa18.18■□□□□ 0.5
GNE-202ENST00000396594 IL15P40933 162 aaPredicted RBP18.17■□□□□ 0.5
GNE-202ENST00000396594 CETN1Q12798 172 aa18.17■□□□□ 0.5
GNE-202ENST00000396594 TAF4BQ92750 862 aa18.17■□□□□ 0.5
GNE-202ENST00000396594 ATP2B1P20020 1258 aa18.17■□□□□ 0.5
GNE-202ENST00000396594 NAP1L4Q99733 375 aaKnown RBP18.17■□□□□ 0.5
GNE-202ENST00000396594 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
GNE-202ENST00000396594 EDC4Q6P2E9 1401 aaKnown RBP18.17■□□□□ 0.5
GNE-202ENST00000396594 FOXO3O43524 673 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 MYO1BO43795 1136 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 CALM1P0DP23 149 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 CALM2P0DP24 149 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 CALM3P0DP25 149 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
GNE-202ENST00000396594 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 TANGO6Q9C0B7 1094 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 HDAC9Q9UKV0 1011 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 DHX37Q8IY37 1157 aaKnown RBP18.16■□□□□ 0.5
GNE-202ENST00000396594 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 UVSSAQ2YD98 709 aa18.16■□□□□ 0.5
GNE-202ENST00000396594 GSDMDP57764 484 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 CCDC194A0A1B0GVG4 234 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 PIP4K2BP78356 416 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 ABCF2Q9UG63 623 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
GNE-202ENST00000396594 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 RMND1Q9NWS8 449 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
GNE-202ENST00000396594 MAP3K2Q9Y2U5 619 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
GNE-202ENST00000396594 TUBB4AP04350 444 aa18.14■□□□□ 0.5
GNE-202ENST00000396594 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.5
GNE-202ENST00000396594 DDX12PQ92771 950 aa18.14■□□□□ 0.5
GNE-202ENST00000396594 USP37Q86T82 979 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 CCDC112Q8NEF3 446 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 YTHDC2Q9H6S0 1430 aaKnown RBP18.14■□□□□ 0.49
GNE-202ENST00000396594 RTL1A6NKG5 1358 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 GOLGA6L7A0A1B0GV03 622 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 GOLGA8AA7E2F4 631 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 GOLGA8BA8MQT2 603 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 MCM5P33992 734 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 KSR2Q6VAB6 950 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 ARHGEF10O15013 1369 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 POTEB2H3BUK9 544 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 GRPEL1Q9HAV7 217 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 TRIM27P14373 513 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 MBIPQ9NS73 344 aa18.14■□□□□ 0.49
GNE-202ENST00000396594 CCDC172P0C7W6 258 aa18.13■□□□□ 0.49
GNE-202ENST00000396594 CALML4Q96GE6 196 aa18.13■□□□□ 0.49
GNE-202ENST00000396594 STK3Q13188 491 aa18.13■□□□□ 0.49
GNE-202ENST00000396594 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
GNE-202ENST00000396594 COL17A1Q9UMD9 1497 aaPredicted RBP18.13■□□□□ 0.49
GNE-202ENST00000396594 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
GNE-202ENST00000396594 PRPF40BQ6NWY9 871 aaKnown RBP18.13■□□□□ 0.49
GNE-202ENST00000396594 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 GOLIM4O00461 696 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 EIF5P55010 431 aaKnown RBP18.12■□□□□ 0.49
GNE-202ENST00000396594 ERMNQ8TAM6 284 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 SPA17Q15506 151 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 FMNL3Q8IVF7 1028 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
GNE-202ENST00000396594 TCP11L1Q9NUJ3 509 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms