RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 TBC1D9BQ66K14 1250 aa9.36□□□□□ -0.91
XCR1-202ENST00000395946 MASTLQ96GX5 879 aa9.36□□□□□ -0.91
XCR1-202ENST00000395946 BCORQ6W2J9 1755 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 ARFGEF2Q9Y6D5 1785 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 BTBD11A6QL63 1104 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 NPHP1O15259 732 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 CAMTA2O94983 1202 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 SRGNP10124 158 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
XCR1-202ENST00000395946 DZIP3Q86Y13 1208 aaKnown RBP9.35□□□□□ -0.91
XCR1-202ENST00000395946 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
XCR1-202ENST00000395946 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
XCR1-202ENST00000395946 KLRG2A4D1S0 409 aaPredicted RBP9.34□□□□□ -0.91
XCR1-202ENST00000395946 SNRPA1P09661 255 aaKnown RBP9.34□□□□□ -0.91
XCR1-202ENST00000395946 PRELPP51888 382 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 PRPF40BQ6NWY9 871 aaKnown RBP9.34□□□□□ -0.91
XCR1-202ENST00000395946 BICDL1Q6ZP65 573 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 L3MBTL3Q96JM7 780 aaPredicted RBP9.34□□□□□ -0.91
XCR1-202ENST00000395946 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 ANKRD31Q8N7Z5 1873 aa9.34□□□□□ -0.91
XCR1-202ENST00000395946 COL11A2P13942 1736 aaPredicted RBP9.34□□□□□ -0.92
XCR1-202ENST00000395946 RIC1Q4ADV7 1423 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 C21orf2O43822 256 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 NPR1P16066 1061 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 PRKAR2BP31323 418 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 CHADLQ6NUI6 762 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
XCR1-202ENST00000395946 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
XCR1-202ENST00000395946 POTECB2RU33 542 aa9.32□□□□□ -0.92
XCR1-202ENST00000395946 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
XCR1-202ENST00000395946 LDHDQ86WU2 507 aa9.32□□□□□ -0.92
XCR1-202ENST00000395946 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
XCR1-202ENST00000395946 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
XCR1-202ENST00000395946 PNISRQ8TF01 805 aaKnown RBP9.32□□□□□ -0.92
XCR1-202ENST00000395946 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
XCR1-202ENST00000395946 DICER1Q9UPY3 1922 aaKnown RBP9.32□□□□□ -0.92
XCR1-202ENST00000395946 A1BGP04217 495 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 NEFMP07197 916 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 HSPA1AP0DMV8 641 aaKnown RBP9.31□□□□□ -0.92
XCR1-202ENST00000395946 HSPA1BP0DMV9 641 aaKnown RBP9.31□□□□□ -0.92
XCR1-202ENST00000395946 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 HTRA3P83110 453 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 FKBP4Q02790 459 aaKnown RBP eCLIP9.31□□□□□ -0.92
XCR1-202ENST00000395946 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 C7orf43Q8WVR3 580 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 NYXQ9GZU5 481 aa9.31□□□□□ -0.92
XCR1-202ENST00000395946 COL13A1Q5TAT6 717 aaPredicted RBP9.3□□□□□ -0.92
XCR1-202ENST00000395946 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
XCR1-202ENST00000395946 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
XCR1-202ENST00000395946 SCN4AP35499 1836 aa9.3□□□□□ -0.92
XCR1-202ENST00000395946 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
XCR1-202ENST00000395946 CNTNAP1P78357 1384 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 ERVV-1B6SEH8 477 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 CAPN15O75808 1086 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 U2AF1L5P0DN76 240 aaPredicted RBP9.29□□□□□ -0.92
XCR1-202ENST00000395946 U2AF1Q01081 240 aaKnown RBP eCLIP9.29□□□□□ -0.92
XCR1-202ENST00000395946 CRY2Q49AN0 593 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 PSMD1Q99460 953 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
XCR1-202ENST00000395946 NIP7Q9Y221 180 aaKnown RBP eCLIP9.29□□□□□ -0.92
XCR1-202ENST00000395946 USP16Q9Y5T5 823 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 PASKQ96RG2 1323 aa9.29□□□□□ -0.92
XCR1-202ENST00000395946 DDNO94850 711 aaPredicted RBP9.28□□□□□ -0.92
XCR1-202ENST00000395946 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
XCR1-202ENST00000395946 TAF7Q15545 349 aaPredicted RBP9.28□□□□□ -0.92
XCR1-202ENST00000395946 TAF1DQ9H5J8 278 aaPredicted RBP9.28□□□□□ -0.92
XCR1-202ENST00000395946 SNED1Q8TER0 1413 aa9.28□□□□□ -0.92
XCR1-202ENST00000395946 RNF123Q5XPI4 1314 aa9.28□□□□□ -0.92
XCR1-202ENST00000395946 SLX4Q8IY92 1834 aa9.27□□□□□ -0.93
XCR1-202ENST00000395946 FZD9O00144 591 aa9.27□□□□□ -0.93
XCR1-202ENST00000395946 GPC2Q8N158 579 aa9.27□□□□□ -0.93
XCR1-202ENST00000395946 VPS33BQ9H267 617 aa9.27□□□□□ -0.93
XCR1-202ENST00000395946 PRDM10Q9NQV6 1147 aa9.27□□□□□ -0.93
XCR1-202ENST00000395946 HACL1Q9UJ83 578 aa9.27□□□□□ -0.93
XCR1-202ENST00000395946 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 KCNQ3O43525 872 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
XCR1-202ENST00000395946 HOXA10P31260 410 aaPredicted RBP9.26□□□□□ -0.93
XCR1-202ENST00000395946 IARSP41252 1262 aaKnown RBP9.26□□□□□ -0.93
XCR1-202ENST00000395946 NBPF10Q6P3W6 841 aaKnown RBP9.26□□□□□ -0.93
XCR1-202ENST00000395946 KIF6Q6ZMV9 814 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 MCM10Q7L590 875 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 NBPF15Q8N660 670 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 JDP2Q8WYK2 163 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 ZNF219Q9P2Y4 722 aaPredicted RBP9.26□□□□□ -0.93
XCR1-202ENST00000395946 ADAMTSL1Q8N6G6 1762 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 MAP3K15Q6ZN16 1313 aa9.26□□□□□ -0.93
XCR1-202ENST00000395946 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
XCR1-202ENST00000395946 EPHX2P34913 555 aa9.25□□□□□ -0.93
XCR1-202ENST00000395946 PARP10Q53GL7 1025 aa9.25□□□□□ -0.93
XCR1-202ENST00000395946 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
XCR1-202ENST00000395946 AIDAQ96BJ3 306 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms