RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 RFX7Q2KHR2 1363 aa17.65■□□□□ 0.42
CDC42SE2-202ENST00000395246 VPS72Q15906 364 aa17.65■□□□□ 0.42
CDC42SE2-202ENST00000395246 MYH14Q7Z406 1995 aaKnown RBP17.65■□□□□ 0.42
CDC42SE2-202ENST00000395246 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.42
CDC42SE2-202ENST00000395246 ATG3Q9NT62 314 aa17.64■□□□□ 0.42
CDC42SE2-202ENST00000395246 H7C1W4 665 aa17.64■□□□□ 0.41
CDC42SE2-202ENST00000395246 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
CDC42SE2-202ENST00000395246 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
CDC42SE2-202ENST00000395246 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
CDC42SE2-202ENST00000395246 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
CDC42SE2-202ENST00000395246 GRM8O00222 908 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 RGS3P49796 1198 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 GCKRQ14397 625 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 SNX21Q969T3 373 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 DOCK2Q92608 1830 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 ZBTB22O15209 634 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 HSP90AB4PQ58FF6 505 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 ISCA1Q9BUE6 129 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 ANKRD45Q5TZF3 282 aa17.63■□□□□ 0.41
CDC42SE2-202ENST00000395246 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
CDC42SE2-202ENST00000395246 TTC41PQ6P2S7 1318 aa17.62■□□□□ 0.41
CDC42SE2-202ENST00000395246 KIF2CQ99661 725 aa17.62■□□□□ 0.41
CDC42SE2-202ENST00000395246 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
CDC42SE2-202ENST00000395246 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
CDC42SE2-202ENST00000395246 PDE1AP54750 535 aa17.61■□□□□ 0.41
CDC42SE2-202ENST00000395246 PIGBQ92521 554 aa17.61■□□□□ 0.41
CDC42SE2-202ENST00000395246 LRRCC1Q9C099 1032 aa17.61■□□□□ 0.41
CDC42SE2-202ENST00000395246 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
CDC42SE2-202ENST00000395246 COPRSQ9NQ92 184 aa17.61■□□□□ 0.41
CDC42SE2-202ENST00000395246 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
CDC42SE2-202ENST00000395246 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
CDC42SE2-202ENST00000395246 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
CDC42SE2-202ENST00000395246 DDIT3P35638 169 aa17.6■□□□□ 0.41
CDC42SE2-202ENST00000395246 ANKRD13DQ6ZTN6 518 aa17.6■□□□□ 0.41
CDC42SE2-202ENST00000395246 PI4K2BQ8TCG2 481 aa17.59■□□□□ 0.41
CDC42SE2-202ENST00000395246 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
CDC42SE2-202ENST00000395246 CDC45O75419 566 aa17.59■□□□□ 0.41
CDC42SE2-202ENST00000395246 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
CDC42SE2-202ENST00000395246 ERC1Q8IUD2 1116 aa17.58■□□□□ 0.41
CDC42SE2-202ENST00000395246 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.4
CDC42SE2-202ENST00000395246 XAGE3Q8WTP9 111 aa17.58■□□□□ 0.4
CDC42SE2-202ENST00000395246 KIF1BPQ96EK5 621 aa17.58■□□□□ 0.4
CDC42SE2-202ENST00000395246 ERVV-1B6SEH8 477 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 CCDC191Q8NCU4 936 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 GPR108Q9NPR9 543 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 EVA1CP58658 441 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 RTL9Q8NET4 1388 aa17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-202ENST00000395246 UBR3Q6ZT12 1888 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 BRWD3Q6RI45 1802 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 FOXO4P98177 505 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 COPS6Q7L5N1 327 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 AK7Q96M32 723 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 MYH7P12883 1935 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
CDC42SE2-202ENST00000395246 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
CDC42SE2-202ENST00000395246 ABCC12Q96J65 1359 aa17.55■□□□□ 0.4
CDC42SE2-202ENST00000395246 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
CDC42SE2-202ENST00000395246 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
CDC42SE2-202ENST00000395246 KCNB2Q92953 911 aa17.54■□□□□ 0.4
CDC42SE2-202ENST00000395246 ANTXR1Q9H6X2 564 aa17.54■□□□□ 0.4
CDC42SE2-202ENST00000395246 CIAO1O76071 339 aa17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 SDSP20132 328 aa17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 MX1P20591 662 aa17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 EXOC5O00471 708 aa17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 CSF1RP07333 972 aa17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 AKAP11Q9UKA4 1901 aa17.53■□□□□ 0.4
CDC42SE2-202ENST00000395246 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
CDC42SE2-202ENST00000395246 LAMA4Q16363 1823 aa17.52■□□□□ 0.39
CDC42SE2-202ENST00000395246 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.39
CDC42SE2-202ENST00000395246 USP26Q9BXU7 913 aa17.52■□□□□ 0.39
CDC42SE2-202ENST00000395246 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.39
CDC42SE2-202ENST00000395246 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 MAP3K15Q6ZN16 1313 aa17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 ZNF609O15014 1411 aa17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 NEXNQ0ZGT2 675 aa17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDC42SE2-202ENST00000395246 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
CDC42SE2-202ENST00000395246 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
CDC42SE2-202ENST00000395246 SASH1O94885 1247 aa17.5■□□□□ 0.39
CDC42SE2-202ENST00000395246 ANXA1P04083 346 aa17.5■□□□□ 0.39
CDC42SE2-202ENST00000395246 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
CDC42SE2-202ENST00000395246 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
CDC42SE2-202ENST00000395246 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE2-202ENST00000395246 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
CDC42SE2-202ENST00000395246 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
CDC42SE2-202ENST00000395246 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
CDC42SE2-202ENST00000395246 EIF5P55010 431 aaKnown RBP17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
CDC42SE2-202ENST00000395246 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms