RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TMEM57Q8N5G2 664 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 FEZ1Q99689 392 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 GOLGA8AA7E2F4 631 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 IFIT3O14879 490 aaKnown RBP14.11□□□□□ -0.15
SIN3A-202ENST00000394947 KRT13P13646 458 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 GIGYF2Q6Y7W6 1299 aaKnown RBP14.11□□□□□ -0.15
SIN3A-202ENST00000394947 RSPH14Q9UHP6 348 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 AFMP43652 599 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
SIN3A-202ENST00000394947 ALS2CR12Q96Q35 445 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 NDC80O14777 642 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 HSF2BPO75031 334 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 SF3A3Q12874 501 aaKnown RBP eCLIP14.1□□□□□ -0.15
SIN3A-202ENST00000394947 C6orf163Q5TEZ5 329 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 TAOK3Q9H2K8 898 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 ADAMTS2O95450 1211 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 GSTA5Q7RTV2 222 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 RRP9O43818 475 aaKnown RBP14.1□□□□□ -0.15
SIN3A-202ENST00000394947 CCDC183Q5T5S1 534 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 ZMYND15Q9H091 742 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 MRVI1Q9Y6F6 885 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 F6X3S4 739 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 F8W031 263 aaPredicted RBP14.1□□□□□ -0.15
SIN3A-202ENST00000394947 MVPQ14764 893 aaKnown RBP14.1□□□□□ -0.15
SIN3A-202ENST00000394947 CAPZA3Q96KX2 299 aa14.1□□□□□ -0.15
SIN3A-202ENST00000394947 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
SIN3A-202ENST00000394947 PLS1Q14651 629 aa14.09□□□□□ -0.15
SIN3A-202ENST00000394947 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
SIN3A-202ENST00000394947 CCDC194A0A1B0GVG4 234 aa14.09□□□□□ -0.15
SIN3A-202ENST00000394947 CEP112Q8N8E3 955 aa14.09□□□□□ -0.15
SIN3A-202ENST00000394947 SNRKQ9NRH2 765 aa14.09□□□□□ -0.15
SIN3A-202ENST00000394947 ERCC5P28715 1186 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-202ENST00000394947 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-202ENST00000394947 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-202ENST00000394947 ZNF213O14771 459 aa14.08□□□□□ -0.15
SIN3A-202ENST00000394947 ADCY5O95622 1261 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 GTF2A1P52655 376 aaPredicted RBP14.08□□□□□ -0.16
SIN3A-202ENST00000394947 SNW1Q13573 536 aaKnown RBP14.08□□□□□ -0.16
SIN3A-202ENST00000394947 IGSF3O75054 1194 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 ATF7IPQ6VMQ6 1270 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 SPECC1LQ69YQ0 1117 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 SIRT1Q96EB6 747 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 HGSO14964 777 aaPredicted RBP14.08□□□□□ -0.16
SIN3A-202ENST00000394947 ERCC3P19447 782 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 CEP57Q86XR8 500 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
SIN3A-202ENST00000394947 ZSCAN30Q86W11 494 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 CCDC50Q8IVM0 306 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
SIN3A-202ENST00000394947 FGFR1OPO95684 399 aaKnown RBP14.07□□□□□ -0.16
SIN3A-202ENST00000394947 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 CEP135Q66GS9 1140 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 PRDM11Q9NQV5 511 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 ZBTB21Q9ULJ3 1066 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 C6orf229H3BNL8 230 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 GJB2P29033 226 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 MCM6Q14566 821 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
SIN3A-202ENST00000394947 IQCGQ9H095 443 aaKnown RBP14.07□□□□□ -0.16
SIN3A-202ENST00000394947 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
SIN3A-202ENST00000394947 MICU3Q86XE3 530 aa14.07□□□□□ -0.16
SIN3A-202ENST00000394947 SLC26A6Q9BXS9 759 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 GNG11P61952 73 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 KIAA0753Q2KHM9 967 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 ATRIPQ8WXE1 791 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 CALML4Q96GE6 196 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 LRRC2Q9BYS8 371 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 CCDC25Q86WR0 208 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 KRT32Q14532 448 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 KIF4AO95239 1232 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
SIN3A-202ENST00000394947 PPP2R5CQ13362 524 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 NBPF1Q3BBV0 1214 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 SEPT14Q6ZU15 432 aa14.06□□□□□ -0.16
SIN3A-202ENST00000394947 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 MCM3P25205 808 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 ACTN2P35609 894 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 PHACTR2O75167 634 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■□□□ 13.9
SIN3A-202ENST00000394947 NAA15Q9BXJ9 866 aaKnown RBP14.05□□□□□ -0.16
SIN3A-202ENST00000394947 CALCOCO1Q9P1Z2 691 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 ZBTB16Q05516 673 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 MAP7D1Q3KQU3 841 aa14.05□□□□□ -0.16
SIN3A-202ENST00000394947 UAP1Q16222 522 aaPredicted RBP14.04□□□□□ -0.16
SIN3A-202ENST00000394947 GIMAP6Q6P9H5 292 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 RPUSD2Q8IZ73 545 aaKnown RBP14.04□□□□□ -0.16
SIN3A-202ENST00000394947 CATIPQ7Z7H3 387 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 CCDC65Q8IXS2 484 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 ODF2LQ9ULJ1 636 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 MX1P20591 662 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 SP4Q02446 784 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 TRIM47Q96LD4 638 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 IQSEC3Q9UPP2 1182 aaPredicted RBP14.04□□□□□ -0.16
SIN3A-202ENST00000394947 GOLIM4O00461 696 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 RABEP2Q9H5N1 569 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 RRBP1Q9P2E9 1410 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms