RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 NIP7Q9Y221 180 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDH11-202ENST00000394156 ZNF76P36508 570 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 CCDC96Q2M329 555 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 ERCC6L2Q5T890 1561 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 FAM98CQ17RN3 349 aaKnown RBP10.73□□□□□ -0.69
CDH11-202ENST00000394156 LMBR1LQ6UX01 489 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 MAP3K19Q56UN5 1328 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 DNA2P51530 1060 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 GOLGA8BA8MQT2 603 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 ANKRD20A12PQ8NF67 263 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 GRPEL1Q9HAV7 217 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 ATP7AQ04656 1500 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
CDH11-202ENST00000394156 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 TNPO1Q92973 898 aaKnown RBP10.73□□□□□ -0.69
CDH11-202ENST00000394156 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 ZNF652Q9Y2D9 606 aa10.73□□□□□ -0.69
CDH11-202ENST00000394156 MCM4P33991 863 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 TFCP2Q12800 502 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 CT47A1Q5JQC4 288 aaPredicted RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 FAM89AQ96GI7 184 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 A1BGP04217 495 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 HCLS1P14317 486 aaPredicted RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 LTKP29376 864 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 ZNF396Q96N95 335 aaPredicted RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 GLRX3O76003 335 aaKnown RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 SLC5A1P13866 664 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 ZNF771Q7L3S4 317 aaPredicted RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 YEATS2Q9ULM3 1422 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 ZNF830Q96NB3 372 aaPredicted RBP10.72□□□□□ -0.69
CDH11-202ENST00000394156 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
CDH11-202ENST00000394156 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
CDH11-202ENST00000394156 TTC22Q5TAA0 569 aa10.71□□□□□ -0.69
CDH11-202ENST00000394156 SOGA3Q5TF21 947 aa10.71□□□□□ -0.69
CDH11-202ENST00000394156 TTC37Q6PGP7 1564 aa10.71□□□□□ -0.69
CDH11-202ENST00000394156 OFD1O75665 1012 aa10.71□□□□□ -0.7
CDH11-202ENST00000394156 KRT85P78386 507 aa10.71□□□□□ -0.7
CDH11-202ENST00000394156 NUCB1Q02818 461 aa10.71□□□□□ -0.7
CDH11-202ENST00000394156 VSIG10Q8N0Z9 540 aa10.71□□□□□ -0.7
CDH11-202ENST00000394156 SAP30BPQ9UHR5 308 aaKnown RBP10.71□□□□□ -0.7
CDH11-202ENST00000394156 TAF5LO75529 589 aa10.71□□□□□ -0.7
CDH11-202ENST00000394156 CT47B1P0C2W7 299 aaPredicted RBP10.71□□□□□ -0.7
CDH11-202ENST00000394156 KIF1BO60333 1816 aa10.71□□□□□ -0.7
CDH11-202ENST00000394156 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.7
CDH11-202ENST00000394156 LMTK3Q96Q04 1460 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.7□□□□□ -0.7
CDH11-202ENST00000394156 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 ABCC2Q92887 1545 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
CDH11-202ENST00000394156 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
CDH11-202ENST00000394156 TIMM10P62072 90 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 DDB1Q16531 1140 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 MMRN2Q9H8L6 949 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 PTPRCP08575 1304 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 MAGEC2Q9UBF1 373 aaPredicted RBP10.7□□□□□ -0.7
CDH11-202ENST00000394156 SLC12A7Q9Y666 1083 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 TARBP1Q13395 1621 aaKnown RBP10.7□□□□□ -0.7
CDH11-202ENST00000394156 ZSCAN25Q6NSZ9 544 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 SLC26A6Q9BXS9 759 aa10.7□□□□□ -0.7
CDH11-202ENST00000394156 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
CDH11-202ENST00000394156 VAMP4O75379 141 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 MRE11P49959 708 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 AKAP2Q9Y2D5 859 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 GCC2Q8IWJ2 1684 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 GRM8O00222 908 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 NMIQ13287 307 aaPredicted RBP10.69□□□□□ -0.7
CDH11-202ENST00000394156 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
CDH11-202ENST00000394156 TCOF1Q13428 1488 aaKnown RBP10.69□□□□□ -0.7
CDH11-202ENST00000394156 TMEM67Q5HYA8 995 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 ZNF444Q8N0Y2 327 aaPredicted RBP10.69□□□□□ -0.7
CDH11-202ENST00000394156 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
CDH11-202ENST00000394156 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
CDH11-202ENST00000394156 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 MAGEB6Q8N7X4 407 aa10.69□□□□□ -0.7
CDH11-202ENST00000394156 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 ANKRD1Q15327 319 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 SETDB2Q96T68 719 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 MAP3K12Q12852 859 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 NUP62CLQ9H1M0 184 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 TRMT1Q9NXH9 659 aaKnown RBP10.68□□□□□ -0.7
CDH11-202ENST00000394156 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 ZGPATQ8N5A5 531 aaKnown RBP10.68□□□□□ -0.7
CDH11-202ENST00000394156 MNS1Q8NEH6 495 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 GOLGA8AA7E2F4 631 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 RNMTO43148 476 aaKnown RBP10.68□□□□□ -0.7
CDH11-202ENST00000394156 EIF6P56537 245 aaKnown RBP10.68□□□□□ -0.7
CDH11-202ENST00000394156 FAM193AP78312 1265 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
CDH11-202ENST00000394156 SAMD9LQ8IVG5 1584 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 TNNT1P13805 278 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 TXLNAP40222 546 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms