RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 BICC1Q9H694 974 aaKnown RBP13.51□□□□□ -0.25
CASP3-202ENST00000393585 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
CASP3-202ENST00000393585 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
CASP3-202ENST00000393585 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 UTYO14607 1347 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 A1BGP04217 495 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 GCKRQ14397 625 aa13.5□□□□□ -0.25
CASP3-202ENST00000393585 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
CASP3-202ENST00000393585 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 RILPL2Q969X0 211 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
CASP3-202ENST00000393585 TMOD3Q9NYL9 352 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
CASP3-202ENST00000393585 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
CASP3-202ENST00000393585 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 TTLL7Q6ZT98 887 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
CASP3-202ENST00000393585 MAP4K4O95819 1239 aaPredicted RBP13.47□□□□□ -0.25
CASP3-202ENST00000393585 USP26Q9BXU7 913 aa13.47□□□□□ -0.25
CASP3-202ENST00000393585 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
CASP3-202ENST00000393585 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
CASP3-202ENST00000393585 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
CASP3-202ENST00000393585 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
CASP3-202ENST00000393585 PIGBQ92521 554 aa13.47□□□□□ -0.25
CASP3-202ENST00000393585 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
CASP3-202ENST00000393585 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
CASP3-202ENST00000393585 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
CASP3-202ENST00000393585 PIP4K2BP78356 416 aa13.46□□□□□ -0.25
CASP3-202ENST00000393585 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
CASP3-202ENST00000393585 SIL1Q9H173 461 aa13.46□□□□□ -0.25
CASP3-202ENST00000393585 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
CASP3-202ENST00000393585 DISP2A7MBM2 1401 aa13.46□□□□□ -0.25
CASP3-202ENST00000393585 ERBB4Q15303 1308 aa13.46□□□□□ -0.26
CASP3-202ENST00000393585 ERC2O15083 957 aa13.45□□□□□ -0.26
CASP3-202ENST00000393585 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
CASP3-202ENST00000393585 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
CASP3-202ENST00000393585 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
CASP3-202ENST00000393585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
CASP3-202ENST00000393585 A0A087WZG4 1122 aa13.45□□□□□ -0.26
CASP3-202ENST00000393585 PHLPP1O60346 1717 aa13.45□□□□□ -0.26
CASP3-202ENST00000393585 AOX1Q06278 1338 aa13.45□□□□□ -0.26
CASP3-202ENST00000393585 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
CASP3-202ENST00000393585 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
CASP3-202ENST00000393585 NUTM2AQ8IVF1 878 aaPredicted RBP13.44□□□□□ -0.26
CASP3-202ENST00000393585 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
CASP3-202ENST00000393585 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
CASP3-202ENST00000393585 SASH1O94885 1247 aa13.44□□□□□ -0.26
CASP3-202ENST00000393585 REC8O95072 547 aa13.44□□□□□ -0.26
CASP3-202ENST00000393585 CHMLP26374 656 aa13.44□□□□□ -0.26
CASP3-202ENST00000393585 SNX21Q969T3 373 aa13.44□□□□□ -0.26
CASP3-202ENST00000393585 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
CASP3-202ENST00000393585 EXOC5O00471 708 aa13.43□□□□□ -0.26
CASP3-202ENST00000393585 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
CASP3-202ENST00000393585 DNAJC10Q8IXB1 793 aa13.43□□□□□ -0.26
CASP3-202ENST00000393585 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
CASP3-202ENST00000393585 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
CASP3-202ENST00000393585 ITGB4P16144 1822 aa13.43□□□□□ -0.26
CASP3-202ENST00000393585 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
CASP3-202ENST00000393585 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
CASP3-202ENST00000393585 AACSQ86V21 672 aa13.42□□□□□ -0.26
CASP3-202ENST00000393585 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
CASP3-202ENST00000393585 IL25Q9H293 177 aa13.42□□□□□ -0.26
CASP3-202ENST00000393585 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
CASP3-202ENST00000393585 NUP188Q5SRE5 1749 aa13.41□□□□□ -0.26
CASP3-202ENST00000393585 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
CASP3-202ENST00000393585 CASP7P55210 303 aa13.41□□□□□ -0.26
CASP3-202ENST00000393585 EAF2Q96CJ1 260 aaPredicted RBP13.41□□□□□ -0.26
CASP3-202ENST00000393585 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
CASP3-202ENST00000393585 A0A0G2JS52 829 aa13.41□□□□□ -0.26
CASP3-202ENST00000393585 ANO2Q9NQ90 1003 aa13.41□□□□□ -0.26
CASP3-202ENST00000393585 BCL9O00512 1426 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 ARXQ96QS3 562 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 TLR7Q9NYK1 1049 aaKnown RBP13.4□□□□□ -0.26
CASP3-202ENST00000393585 TTC41PQ6P2S7 1318 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
CASP3-202ENST00000393585 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
CASP3-202ENST00000393585 PTPN12Q05209 780 aaKnown RBP13.4□□□□□ -0.26
CASP3-202ENST00000393585 RABEP1Q15276 862 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 ECHDC1Q9NTX5 307 aa13.4□□□□□ -0.26
CASP3-202ENST00000393585 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
CASP3-202ENST00000393585 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.27
CASP3-202ENST00000393585 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.27
CASP3-202ENST00000393585 K7ELQ4 463 aaPredicted RBP13.39□□□□□ -0.27
CASP3-202ENST00000393585 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
CASP3-202ENST00000393585 RABL6Q3YEC7 729 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms