RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 PREX1Q8TCU6 1659 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-203ENST00000393287 NEURL4Q96JN8 1562 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 BCAR3O75815 825 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
ATXN3-203ENST00000393287 DRC7Q8IY82 874 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 EYA3Q99504 573 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 LRP2BPQ9P2M1 347 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 HDAC9Q9UKV0 1011 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 BCORL1Q5H9F3 1711 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 TPTE2Q6XPS3 522 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 MED14O60244 1454 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 C22orf23Q9BZE7 217 aa9.67□□□□□ -0.86
ATXN3-203ENST00000393287 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 GNPATO15228 680 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 DEPDC5O75140 1603 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 TMEM57Q8N5G2 664 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 ANKRD20A12PQ8NF67 263 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 AIDAQ96BJ3 306 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 RNF41Q9H4P4 317 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-203ENST00000393287 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 HMGB1P09429 215 aaKnown RBP9.66□□□□□ -0.86
ATXN3-203ENST00000393287 IMMTQ16891 758 aaKnown RBP9.66□□□□□ -0.86
ATXN3-203ENST00000393287 SSH1Q8WYL5 1049 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 ANKRD18AQ8IVF6 992 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 MST1RQ04912 1400 aa9.66□□□□□ -0.86
ATXN3-203ENST00000393287 MYO1BO43795 1136 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 ZNF804AQ7Z570 1209 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 CYP46A1Q9Y6A2 500 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 MROH1Q8NDA8 1641 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 TPRNQ4KMQ1 711 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 BAG3O95817 575 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 DZIP3Q86Y13 1208 aaKnown RBP9.65□□□□□ -0.86
ATXN3-203ENST00000393287 DZIP1Q86YF9 867 aaKnown RBP9.65□□□□□ -0.86
ATXN3-203ENST00000393287 SIL1Q9H173 461 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 CERS3Q8IU89 383 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 SUPT20HQ8NEM7 779 aa9.65□□□□□ -0.86
ATXN3-203ENST00000393287 IKQ13123 557 aaPredicted RBP9.65□□□□□ -0.87
ATXN3-203ENST00000393287 ZNF396Q96N95 335 aaPredicted RBP9.65□□□□□ -0.87
ATXN3-203ENST00000393287 MX1P20591 662 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
ATXN3-203ENST00000393287 TPM3P06753 285 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 TDO2P48775 406 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-203ENST00000393287 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 TPM1P09493 284 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
ATXN3-203ENST00000393287 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 EHMT1Q9H9B1 1298 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 TRAF1Q13077 416 aa9.64□□□□□ -0.87
ATXN3-203ENST00000393287 ZFYP08048 801 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 XAGE3Q8WTP9 111 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 EVI5LQ96CN4 794 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 DDX21Q9NR30 783 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 CHMP5Q9NZZ3 219 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 U3KPZ7 1027 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 USP19O94966 1318 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 FKBP4Q02790 459 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 GPTP24298 496 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 IL15P40933 162 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 UBAC1Q9BSL1 405 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 CPSF1Q10570 1443 aaKnown RBP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 LETM1O95202 739 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 TXLNAP40222 546 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 USP5P45974 858 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
ATXN3-203ENST00000393287 CDK12Q9NYV4 1490 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-203ENST00000393287 NCAPD2Q15021 1401 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 LINS1Q8NG48 757 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 NOL7Q9UMY1 257 aaKnown RBP9.62□□□□□ -0.87
ATXN3-203ENST00000393287 KIF13AQ9H1H9 1805 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 MRPL50Q8N5N7 158 aaKnown RBP9.62□□□□□ -0.87
ATXN3-203ENST00000393287 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 JMYQ8N9B5 988 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 NIP7Q9Y221 180 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATXN3-203ENST00000393287 CRB1P82279 1406 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 DNTTIP2Q5QJE6 756 aaKnown RBP9.62□□□□□ -0.87
ATXN3-203ENST00000393287 LGR6Q9HBX8 967 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 TMEM131LA2VDJ0 1609 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 PI4KAP2A4QPH2 592 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 CHL1O00533 1208 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 HLA-DOAP06340 250 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
ATXN3-203ENST00000393287 DNAJC10Q8IXB1 793 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 PI4KAP1Q8N8J0 262 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 PNPLA6Q8IY17 1366 aa9.62□□□□□ -0.87
ATXN3-203ENST00000393287 WWC2Q6AWC2 1192 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 ZNF496Q96IT1 587 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 KIAA1210Q9ULL0 1709 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 TRIM37O94972 964 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 PLCG2P16885 1265 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 CHPF2Q9P2E5 772 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms