RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FAM182BQ5T319 152 aa18.57■□□□□ 0.56
MKS1-202ENST00000393119 ARXQ96QS3 562 aa18.57■□□□□ 0.56
MKS1-202ENST00000393119 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
MKS1-202ENST00000393119 KCNQ2O43526 872 aa18.56■□□□□ 0.56
MKS1-202ENST00000393119 BICC1Q9H694 974 aaKnown RBP18.56■□□□□ 0.56
MKS1-202ENST00000393119 CERKQ8TCT0 537 aa18.56■□□□□ 0.56
MKS1-202ENST00000393119 ZBTB47Q9UFB7 747 aaPredicted RBP18.56■□□□□ 0.56
MKS1-202ENST00000393119 TNS2Q63HR2 1409 aa18.56■□□□□ 0.56
MKS1-202ENST00000393119 ALDH1L1O75891 902 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 POLA2Q14181 598 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 GCKRQ14397 625 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 PTF1AQ7RTS3 328 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 HSPA1LP34931 641 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
MKS1-202ENST00000393119 SLIT2O94813 1529 aa18.55■□□□□ 0.56
MKS1-202ENST00000393119 UNC5CLQ8IV45 518 aa18.54■□□□□ 0.56
MKS1-202ENST00000393119 LRRCC1Q9C099 1032 aa18.54■□□□□ 0.56
MKS1-202ENST00000393119 IBTKQ9P2D0 1353 aaPredicted RBP18.54■□□□□ 0.56
MKS1-202ENST00000393119 BCL9O00512 1426 aa18.54■□□□□ 0.56
MKS1-202ENST00000393119 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
MKS1-202ENST00000393119 NRAPQ86VF7 1730 aa18.53■□□□□ 0.56
MKS1-202ENST00000393119 KCNQ4P56696 695 aa18.53■□□□□ 0.56
MKS1-202ENST00000393119 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
MKS1-202ENST00000393119 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
MKS1-202ENST00000393119 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
MKS1-202ENST00000393119 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.56
MKS1-202ENST00000393119 PLBD2Q8NHP8 589 aa18.52■□□□□ 0.56
MKS1-202ENST00000393119 LRP6O75581 1613 aa18.52■□□□□ 0.56
MKS1-202ENST00000393119 SIL1Q9H173 461 aa18.52■□□□□ 0.55
MKS1-202ENST00000393119 PDE1AP54750 535 aa18.51■□□□□ 0.55
MKS1-202ENST00000393119 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
MKS1-202ENST00000393119 UBR2Q8IWV8 1755 aa18.51■□□□□ 0.55
MKS1-202ENST00000393119 JCADQ9P266 1359 aa18.51■□□□□ 0.55
MKS1-202ENST00000393119 A0A087WZG4 1122 aa18.5■□□□□ 0.55
MKS1-202ENST00000393119 SDSP20132 328 aa18.5■□□□□ 0.55
MKS1-202ENST00000393119 PAPPAQ13219 1627 aa18.5■□□□□ 0.55
MKS1-202ENST00000393119 EP400Q96L91 3159 aa18.5■□□□□ 0.55
MKS1-202ENST00000393119 MAP4K4O95819 1239 aaPredicted RBP18.5■□□□□ 0.55
MKS1-202ENST00000393119 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
MKS1-202ENST00000393119 ZBTB1Q9Y2K1 713 aa18.49■□□□□ 0.55
MKS1-202ENST00000393119 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
MKS1-202ENST00000393119 ITGB4P16144 1822 aa18.49■□□□□ 0.55
MKS1-202ENST00000393119 UTYO14607 1347 aa18.49■□□□□ 0.55
MKS1-202ENST00000393119 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
MKS1-202ENST00000393119 TBC1D32Q96NH3 1257 aa18.48■□□□□ 0.55
MKS1-202ENST00000393119 USP21Q9UK80 565 aa18.48■□□□□ 0.55
MKS1-202ENST00000393119 CYP19A1P11511 503 aaPredicted RBP18.48■□□□□ 0.55
MKS1-202ENST00000393119 HLFQ16534 295 aa18.48■□□□□ 0.55
MKS1-202ENST00000393119 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
MKS1-202ENST00000393119 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
MKS1-202ENST00000393119 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
MKS1-202ENST00000393119 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
MKS1-202ENST00000393119 MX1P20591 662 aa18.46■□□□□ 0.55
MKS1-202ENST00000393119 MTX1Q13505 466 aa18.46■□□□□ 0.55
MKS1-202ENST00000393119 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
MKS1-202ENST00000393119 C22orf23Q9BZE7 217 aa18.46■□□□□ 0.55
MKS1-202ENST00000393119 CASP7P55210 303 aa18.46■□□□□ 0.55
MKS1-202ENST00000393119 TBC1D2BQ9UPU7 963 aa18.46■□□□□ 0.55
MKS1-202ENST00000393119 VPS72Q15906 364 aa18.45■□□□□ 0.54
MKS1-202ENST00000393119 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
MKS1-202ENST00000393119 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
MKS1-202ENST00000393119 SASH1O94885 1247 aa18.45■□□□□ 0.54
MKS1-202ENST00000393119 STARD3NLO95772 234 aa18.45■□□□□ 0.54
MKS1-202ENST00000393119 GPTP24298 496 aa18.45■□□□□ 0.54
MKS1-202ENST00000393119 ITPK1Q13572 414 aa18.45■□□□□ 0.54
MKS1-202ENST00000393119 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
MKS1-202ENST00000393119 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
MKS1-202ENST00000393119 DOT1LQ8TEK3 1739 aa18.44■□□□□ 0.54
MKS1-202ENST00000393119 ERBB4Q15303 1308 aa18.44■□□□□ 0.54
MKS1-202ENST00000393119 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
MKS1-202ENST00000393119 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
MKS1-202ENST00000393119 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
MKS1-202ENST00000393119 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
MKS1-202ENST00000393119 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
MKS1-202ENST00000393119 ARFGEF2Q9Y6D5 1785 aa18.43■□□□□ 0.54
MKS1-202ENST00000393119 WNK3Q9BYP7 1800 aa18.43■□□□□ 0.54
MKS1-202ENST00000393119 CDC45O75419 566 aa18.43■□□□□ 0.54
MKS1-202ENST00000393119 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
MKS1-202ENST00000393119 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
MKS1-202ENST00000393119 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
MKS1-202ENST00000393119 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
MKS1-202ENST00000393119 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
MKS1-202ENST00000393119 CWC25Q9NXE8 425 aaPredicted RBP18.42■□□□□ 0.54
MKS1-202ENST00000393119 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 H7C1W4 665 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 RAB11FIP3O75154 756 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 FOXO4P98177 505 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 CCDC8Q9H0W5 538 aaPredicted RBP18.41■□□□□ 0.54
MKS1-202ENST00000393119 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 RFX5P48382 616 aaPredicted RBP18.41■□□□□ 0.54
MKS1-202ENST00000393119 SIK1P57059 783 aa18.41■□□□□ 0.54
MKS1-202ENST00000393119 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
MKS1-202ENST00000393119 PTPN12Q05209 780 aaKnown RBP18.4■□□□□ 0.54
MKS1-202ENST00000393119 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
MKS1-202ENST00000393119 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
MKS1-202ENST00000393119 EAF2Q96CJ1 260 aaPredicted RBP18.4■□□□□ 0.54
MKS1-202ENST00000393119 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms