RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ATP2A2P16615 1042 aaKnown RBP16.93■□□□□ 0.3
CCDC50-201ENST00000392455 LRSAM1Q6UWE0 723 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 USP25Q9UHP3 1055 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 GTF2A1P52655 376 aaPredicted RBP16.92■□□□□ 0.3
CCDC50-201ENST00000392455 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 NDC80O14777 642 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 MXRA7P84157 204 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
CCDC50-201ENST00000392455 RSRC1Q96IZ7 334 aaKnown RBP16.92■□□□□ 0.3
CCDC50-201ENST00000392455 VCX3BQ9H321 246 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
CCDC50-201ENST00000392455 PIP4K2BP78356 416 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
CCDC50-201ENST00000392455 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 RAI14Q9P0K7 980 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 GAS8O95995 478 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
CCDC50-201ENST00000392455 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 USP5P45974 858 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 SCLT1Q96NL6 688 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 LRP2BPQ9P2M1 347 aa16.91■□□□□ 0.3
CCDC50-201ENST00000392455 RBM25P49756 843 aaKnown RBP16.9■□□□□ 0.3
CCDC50-201ENST00000392455 TRAF1Q13077 416 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
CCDC50-201ENST00000392455 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
CCDC50-201ENST00000392455 HAUS2Q9NVX0 235 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 CCDC183Q5T5S1 534 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 PAIP2Q9BPZ3 127 aaKnown RBP16.9■□□□□ 0.3
CCDC50-201ENST00000392455 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 LUC7L2Q9Y383 392 aaKnown RBP16.9■□□□□ 0.3
CCDC50-201ENST00000392455 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 PDE3AQ14432 1141 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 PPP4R3BQ5MIZ7 849 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 MPNDQ8N594 471 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 CEP120Q8N960 986 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 AKNAQ7Z591 1439 aa16.9■□□□□ 0.3
CCDC50-201ENST00000392455 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 RBM10P98175 930 aaKnown RBP16.89■□□□□ 0.29
CCDC50-201ENST00000392455 RRS1Q15050 365 aaKnown RBP16.89■□□□□ 0.29
CCDC50-201ENST00000392455 JAKMIP1Q96N16 626 aaKnown RBP16.89■□□□□ 0.29
CCDC50-201ENST00000392455 BAG4O95429 457 aaKnown RBP16.89■□□□□ 0.29
CCDC50-201ENST00000392455 CFAP58Q5T655 872 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
CCDC50-201ENST00000392455 VCXQ9H320 206 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 PSMC4P43686 418 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
CCDC50-201ENST00000392455 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 ZBTB17Q13105 803 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 ATP5DP30049 168 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 CCDC50Q8IVM0 306 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 IGF1RP08069 1367 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 MACROD2A1Z1Q3 448 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 ZBTB16Q05516 673 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 IFT74Q96LB3 600 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 CASQ2O14958 399 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 AFAP1L2Q8N4X5 818 aa16.88■□□□□ 0.29
CCDC50-201ENST00000392455 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-201ENST00000392455 MSANTD4Q8NCY6 345 aa16.87■□□□□ 0.29
CCDC50-201ENST00000392455 DHX37Q8IY37 1157 aaKnown RBP16.87■□□□□ 0.29
CCDC50-201ENST00000392455 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
CCDC50-201ENST00000392455 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
CCDC50-201ENST00000392455 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
CCDC50-201ENST00000392455 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
CCDC50-201ENST00000392455 CFTRP13569 1480 aa16.87■□□□□ 0.29
CCDC50-201ENST00000392455 MGEA5O60502 916 aa16.87■□□□□ 0.29
CCDC50-201ENST00000392455 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 MAATS1Q7Z4T9 603 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 GOLGA1Q92805 767 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 CACYBPQ9HB71 228 aaKnown RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 XPCQ01831 940 aaPredicted RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 MVPQ14764 893 aaKnown RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 PRIMPOLQ96LW4 560 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 SRRTQ9BXP5 876 aaKnown RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 ERBINQ96RT1 1412 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 A0A1B0GUA9 196 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 SARNPP82979 210 aaKnown RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 CACNA2D3Q8IZS8 1091 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 DZIP1Q86YF9 867 aaKnown RBP16.86■□□□□ 0.29
CCDC50-201ENST00000392455 TCHPQ9BT92 498 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 CEP126Q9P2H0 1117 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 TXNDC16Q9P2K2 825 aa16.86■□□□□ 0.29
CCDC50-201ENST00000392455 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
CCDC50-201ENST00000392455 LMBR1Q8WVP7 490 aa16.85■□□□□ 0.29
CCDC50-201ENST00000392455 CALML4Q96GE6 196 aa16.85■□□□□ 0.29
CCDC50-201ENST00000392455 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
CCDC50-201ENST00000392455 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
CCDC50-201ENST00000392455 ARFGAP3Q9NP61 516 aa16.85■□□□□ 0.29
CCDC50-201ENST00000392455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCDC50-201ENST00000392455 SATB1Q01826 763 aa16.84■□□□□ 0.29
CCDC50-201ENST00000392455 ARFGAP2Q8N6H7 521 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms