RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 MINDY4BA8MYZ0 360 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 ZNF219Q9P2Y4 722 aaPredicted RBP19.62■□□□□ 0.73
SNX9-201ENST00000392185 NBPF7P0C2Y1 421 aaPredicted RBP19.61■□□□□ 0.73
SNX9-201ENST00000392185 EIF4A1P60842 406 aaKnown RBP19.61■□□□□ 0.73
SNX9-201ENST00000392185 AK7Q96M32 723 aa19.61■□□□□ 0.73
SNX9-201ENST00000392185 PPFIA3O75145 1194 aa19.61■□□□□ 0.73
SNX9-201ENST00000392185 SLC52A2Q9HAB3 445 aa19.61■□□□□ 0.73
SNX9-201ENST00000392185 KRT32Q14532 448 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 TCEANC2Q96MN5 208 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 TPD52L1Q16890 204 aaPredicted RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 ARHGEF25Q86VW2 580 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 PLEKHM2Q8IWE5 1019 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 HELBQ8NG08 1087 aaPredicted RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 NIP7Q9Y221 180 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNX9-201ENST00000392185 INSRP06213 1382 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 MAP3K4Q9Y6R4 1608 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 WDR33Q9C0J8 1336 aaKnown RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 IKQ13123 557 aaPredicted RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 IMMTQ16891 758 aaKnown RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 CAVIN4Q5BKX8 364 aa19.6■□□□□ 0.73
SNX9-201ENST00000392185 BICC1Q9H694 974 aaKnown RBP19.6■□□□□ 0.73
SNX9-201ENST00000392185 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
SNX9-201ENST00000392185 HAND2P61296 217 aa19.59■□□□□ 0.73
SNX9-201ENST00000392185 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
SNX9-201ENST00000392185 FAM89AQ96GI7 184 aa19.59■□□□□ 0.73
SNX9-201ENST00000392185 RBM5P52756 815 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNX9-201ENST00000392185 PIBF1Q8WXW3 757 aa19.59■□□□□ 0.73
SNX9-201ENST00000392185 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
SNX9-201ENST00000392185 U3KPZ7 1027 aaPredicted RBP19.59■□□□□ 0.73
SNX9-201ENST00000392185 CROCC2H7BZ55 1655 aa19.59■□□□□ 0.73
SNX9-201ENST00000392185 SLC5A1P13866 664 aa19.58■□□□□ 0.73
SNX9-201ENST00000392185 SASS6Q6UVJ0 657 aa19.58■□□□□ 0.73
SNX9-201ENST00000392185 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
SNX9-201ENST00000392185 PNMA6EA0A0J9YXQ4 647 aa19.58■□□□□ 0.73
SNX9-201ENST00000392185 SLC3A2P08195 630 aaKnown RBP19.58■□□□□ 0.73
SNX9-201ENST00000392185 RFC4P35249 363 aa19.58■□□□□ 0.73
SNX9-201ENST00000392185 DNAJC10Q8IXB1 793 aa19.58■□□□□ 0.73
SNX9-201ENST00000392185 SYNMO15061 1565 aa19.58■□□□□ 0.72
SNX9-201ENST00000392185 ARHGEF10O15013 1369 aa19.58■□□□□ 0.72
SNX9-201ENST00000392185 NBPF5PQ86XG9 351 aaPredicted RBP19.58■□□□□ 0.72
SNX9-201ENST00000392185 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
SNX9-201ENST00000392185 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
SNX9-201ENST00000392185 NAPBQ9H115 298 aa19.57■□□□□ 0.72
SNX9-201ENST00000392185 MAP3K12Q12852 859 aa19.57■□□□□ 0.72
SNX9-201ENST00000392185 UBAC1Q9BSL1 405 aa19.57■□□□□ 0.72
SNX9-201ENST00000392185 AATKQ6ZMQ8 1374 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 CCDC69A6NI79 296 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 STK38Q15208 465 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 SOS1Q07889 1333 aaPredicted RBP19.56■□□□□ 0.72
SNX9-201ENST00000392185 MBD3O95983 291 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 XBP1P17861 261 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 CIZ1Q9ULV3 898 aaPredicted RBP19.56■□□□□ 0.72
SNX9-201ENST00000392185 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 KIAA0232Q92628 1395 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 ATP7BP35670 1465 aa19.56■□□□□ 0.72
SNX9-201ENST00000392185 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
SNX9-201ENST00000392185 TRMT2AQ8IZ69 625 aaKnown RBP19.56■□□□□ 0.72
SNX9-201ENST00000392185 ZSCAN31Q96LW9 406 aaPredicted RBP19.56■□□□□ 0.72
SNX9-201ENST00000392185 E9PCH4 1651 aa19.55■□□□□ 0.72
SNX9-201ENST00000392185 SSFA2P28290 1259 aa19.55■□□□□ 0.72
SNX9-201ENST00000392185 ATP2B3Q16720 1220 aa19.55■□□□□ 0.72
SNX9-201ENST00000392185 CDC5LQ99459 802 aaKnown RBP19.55■□□□□ 0.72
SNX9-201ENST00000392185 CTDP1Q9Y5B0 961 aaPredicted RBP19.55■□□□□ 0.72
SNX9-201ENST00000392185 SPHKAPQ2M3C7 1700 aa19.55■□□□□ 0.72
SNX9-201ENST00000392185 C6orf229H3BNL8 230 aa19.54■□□□□ 0.72
SNX9-201ENST00000392185 ARID3AQ99856 593 aa19.54■□□□□ 0.72
SNX9-201ENST00000392185 GIGYF1O75420 1035 aaPredicted RBP19.54■□□□□ 0.72
SNX9-201ENST00000392185 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
SNX9-201ENST00000392185 ESYT1Q9BSJ8 1104 aa19.54■□□□□ 0.72
SNX9-201ENST00000392185 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
SNX9-201ENST00000392185 KDM2BQ8NHM5 1336 aa19.54■□□□□ 0.72
SNX9-201ENST00000392185 ZSCAN29Q8IWY8 852 aaPredicted RBP19.54■□□□□ 0.72
SNX9-201ENST00000392185 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
SNX9-201ENST00000392185 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
SNX9-201ENST00000392185 BABAM1Q9NWV8 329 aa19.54■□□□□ 0.72
SNX9-201ENST00000392185 PHKG2P15735 406 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 KRT85P78386 507 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 TRIM22Q8IYM9 498 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 HOXB7P09629 217 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 NASPP49321 788 aaPredicted RBP19.53■□□□□ 0.72
SNX9-201ENST00000392185 TIMM10P62072 90 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 GUCY1B3Q02153 619 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
SNX9-201ENST00000392185 CEP152O94986 1710 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 TFCP2Q12800 502 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
SNX9-201ENST00000392185 IRS4O14654 1257 aaPredicted RBP19.52■□□□□ 0.72
SNX9-201ENST00000392185 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
SNX9-201ENST00000392185 ME1P48163 572 aa19.52■□□□□ 0.72
SNX9-201ENST00000392185 CCT2P78371 535 aaKnown RBP19.52■□□□□ 0.72
SNX9-201ENST00000392185 BRMS1Q9HCU9 246 aa19.52■□□□□ 0.72
SNX9-201ENST00000392185 KINO60870 393 aaKnown RBP19.52■□□□□ 0.71
SNX9-201ENST00000392185 SETDB2Q96T68 719 aa19.52■□□□□ 0.71
SNX9-201ENST00000392185 LRRC2Q9BYS8 371 aa19.52■□□□□ 0.71
SNX9-201ENST00000392185 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.71
SNX9-201ENST00000392185 LIMCH1Q9UPQ0 1083 aa19.52■□□□□ 0.71
SNX9-201ENST00000392185 ZNF213O14771 459 aa19.51■□□□□ 0.71
SNX9-201ENST00000392185 DZIP1Q86YF9 867 aaKnown RBP19.51■□□□□ 0.71
SNX9-201ENST00000392185 MPNDQ8N594 471 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms