RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 EXOC6BQ9Y2D4 811 aa14.2□□□□□ -0.14
SMARCAL1-203ENST00000392128 A1BGP04217 495 aa14.2□□□□□ -0.14
SMARCAL1-203ENST00000392128 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
SMARCAL1-203ENST00000392128 MYD88Q99836 296 aa14.2□□□□□ -0.14
SMARCAL1-203ENST00000392128 GCKRQ14397 625 aa14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 LRRCC1Q9C099 1032 aa14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 TJP1Q07157 1748 aa14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 SMARCA5O60264 1052 aaPredicted RBP14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 SEC24BO95487 1268 aa14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 MARCH10Q8NA82 808 aaPredicted RBP14.19□□□□□ -0.14
SMARCAL1-203ENST00000392128 APBB1O00213 710 aa14.18□□□□□ -0.14
SMARCAL1-203ENST00000392128 RAB11FIP3O75154 756 aa14.18□□□□□ -0.14
SMARCAL1-203ENST00000392128 PRIM1P49642 420 aaKnown RBP14.18□□□□□ -0.14
SMARCAL1-203ENST00000392128 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
SMARCAL1-203ENST00000392128 STARD3NLO95772 234 aa14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 DNAJC10Q8IXB1 793 aa14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 CICQ96RK0 1608 aaPredicted RBP14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 COL15A1P39059 1388 aa14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 MSH5O43196 834 aa14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
SMARCAL1-203ENST00000392128 KAZALD1Q96I82 304 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 OSBPL3Q9H4L5 887 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 TTLL7Q6ZT98 887 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 TUBGCP6Q96RT7 1819 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 SALL3Q9BXA9 1300 aa14.16□□□□□ -0.14
SMARCAL1-203ENST00000392128 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
SMARCAL1-203ENST00000392128 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
SMARCAL1-203ENST00000392128 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
SMARCAL1-203ENST00000392128 THSD7AQ9UPZ6 1657 aa14.15□□□□□ -0.14
SMARCAL1-203ENST00000392128 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
SMARCAL1-203ENST00000392128 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
SMARCAL1-203ENST00000392128 BICC1Q9H694 974 aaKnown RBP14.14□□□□□ -0.15
SMARCAL1-203ENST00000392128 USP21Q9UK80 565 aa14.14□□□□□ -0.15
SMARCAL1-203ENST00000392128 CYP19A1P11511 503 aaPredicted RBP14.14□□□□□ -0.15
SMARCAL1-203ENST00000392128 HSPA1LP34931 641 aa14.14□□□□□ -0.15
SMARCAL1-203ENST00000392128 KIF1BPQ96EK5 621 aa14.14□□□□□ -0.15
SMARCAL1-203ENST00000392128 PDE1AP54750 535 aa14.13□□□□□ -0.15
SMARCAL1-203ENST00000392128 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
SMARCAL1-203ENST00000392128 ATP5J2-PTCD1G3V325 749 aa14.13□□□□□ -0.15
SMARCAL1-203ENST00000392128 RHPN1Q8TCX5 695 aa14.13□□□□□ -0.15
SMARCAL1-203ENST00000392128 TBC1D32Q96NH3 1257 aa14.13□□□□□ -0.15
SMARCAL1-203ENST00000392128 RREB1Q92766 1687 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 CASP7P55210 303 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 ACSBG1Q96GR2 724 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 A0A087WZG4 1122 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 CDC45O75419 566 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 MX1P20591 662 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 CCDC191Q8NCU4 936 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 ZBTB3Q9H5J0 574 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 CWC25Q9NXE8 425 aaPredicted RBP14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 STAP2Q9UGK3 403 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 AOX1Q06278 1338 aa14.12□□□□□ -0.15
SMARCAL1-203ENST00000392128 ANKRD36CQ5JPF3 1778 aa14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 H7C1W4 665 aa14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 RABL6Q3YEC7 729 aaPredicted RBP14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 UBE3BQ7Z3V4 1068 aa14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 ERC1Q8IUD2 1116 aa14.11□□□□□ -0.15
SMARCAL1-203ENST00000392128 EPHA10Q5JZY3 1008 aa14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 ISCA1Q9BUE6 129 aa14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 EIF5BO60841 1220 aaKnown RBP14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 MFAP1P55081 439 aaKnown RBP14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 TRIM28Q13263 835 aaKnown RBP14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 TCIRG1Q13488 830 aa14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 SMARCC1Q92922 1105 aaPredicted RBP14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 IL1RAPL2Q9NP60 686 aa14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 MAP3K15Q6ZN16 1313 aa14.1□□□□□ -0.15
SMARCAL1-203ENST00000392128 COL5A3P25940 1745 aaPredicted RBP14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 SDSP20132 328 aa14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 IL6STP40189 918 aaPredicted RBP14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 ZBTB1Q9Y2K1 713 aa14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 PA2G4Q9UQ80 394 aaKnown RBP14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 ZNF330Q9Y3S2 320 aaPredicted RBP14.09□□□□□ -0.15
SMARCAL1-203ENST00000392128 NUP98P52948 1817 aa14.08□□□□□ -0.15
SMARCAL1-203ENST00000392128 LOC102724428A0A0B4J2F2 783 aa14.08□□□□□ -0.16
SMARCAL1-203ENST00000392128 SIK1P57059 783 aa14.08□□□□□ -0.16
SMARCAL1-203ENST00000392128 C22orf23Q9BZE7 217 aa14.08□□□□□ -0.16
SMARCAL1-203ENST00000392128 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
SMARCAL1-203ENST00000392128 ATRNO75882 1429 aa14.08□□□□□ -0.16
SMARCAL1-203ENST00000392128 A0A0G2JS52 829 aa14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 AFF2P51816 1311 aa14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 USP42Q9H9J4 1324 aaKnown RBP14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 ATP6V1AP38606 617 aa14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 G3BP1Q13283 466 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 JARID2Q92833 1246 aaPredicted RBP14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
SMARCAL1-203ENST00000392128 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms