RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SMARCA5O60264 1052 aaPredicted RBP22.89■■□□□ 1.26
SHANK1-203ENST00000391813 PLCD4Q9BRC7 762 aa22.89■■□□□ 1.26
SHANK1-203ENST00000391813 OGFRQ9NZT2 677 aa22.89■■□□□ 1.26
SHANK1-203ENST00000391813 NCKAP5LQ9HCH0 1330 aa22.89■■□□□ 1.25
SHANK1-203ENST00000391813 ANAPC15P60006 121 aa22.89■■□□□ 1.25
SHANK1-203ENST00000391813 TAF7Q15545 349 aaPredicted RBP22.88■■□□□ 1.25
SHANK1-203ENST00000391813 WASF1Q92558 559 aa22.88■■□□□ 1.25
SHANK1-203ENST00000391813 SRRTQ9BXP5 876 aaKnown RBP22.88■■□□□ 1.25
SHANK1-203ENST00000391813 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
SHANK1-203ENST00000391813 ZNF397Q8NF99 534 aaPredicted RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 HMGB1P09429 215 aaKnown RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CCAR1Q8IX12 1150 aaKnown RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 ARHGAP45Q92619 1136 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CNNM1Q9NRU3 951 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CTR9Q6PD62 1173 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 ARFGAP3Q9NP61 516 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CCDC186Q7Z3E2 898 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 TTC12Q9H892 705 aaPredicted RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 CFAP74Q9C0B2 1584 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 SLU7O95391 586 aaKnown RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 NUTM1Q86Y26 1132 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 IFNL2Q8IZJ0 200 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 ZNF830Q96NB3 372 aaPredicted RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 CDK5RAP3Q96JB5 506 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 RNF123Q5XPI4 1314 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 TEX13AQ9BXU3 409 aaPredicted RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 CEP131Q9UPN4 1083 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 ZFYVE16Q7Z3T8 1539 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 KCNA6P17658 529 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 GIMAP6Q6P9H5 292 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 GJB2P29033 226 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
SHANK1-203ENST00000391813 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 PARD3Q8TEW0 1356 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 MYL6BP14649 208 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 U3KPZ7 1027 aaPredicted RBP22.84■■□□□ 1.25
SHANK1-203ENST00000391813 SKILP12757 684 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 ZSCAN25Q6NSZ9 544 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 KDM4AO75164 1064 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
SHANK1-203ENST00000391813 MPHOSPH8Q99549 860 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 PTPRCP08575 1304 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 SLC3A2P08195 630 aaKnown RBP22.83■■□□□ 1.25
SHANK1-203ENST00000391813 FSIP1Q8NA03 581 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 NACAP1Q9BZK3 213 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 CCDC69A6NI79 296 aa22.83■■□□□ 1.24
SHANK1-203ENST00000391813 GTF2A1P52655 376 aaPredicted RBP22.82■■□□□ 1.24
SHANK1-203ENST00000391813 CCDC57Q2TAC2 916 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 TAF4BQ92750 862 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 PPP1R1BQ9UD71 204 aaPredicted RBP22.82■■□□□ 1.24
SHANK1-203ENST00000391813 TCEAL9Q9UHQ7 104 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 PTCD1O75127 700 aaKnown RBP22.81■■□□□ 1.24
SHANK1-203ENST00000391813 TTC39AQ5SRH9 613 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 DNAAF4Q8WXU2 420 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 SIL1Q9H173 461 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 DNMT1P26358 1616 aaKnown RBP22.81■■□□□ 1.24
SHANK1-203ENST00000391813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
SHANK1-203ENST00000391813 ZPR1O75312 459 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 SPA17Q15506 151 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 ZSCAN16Q9H4T2 348 aaPredicted RBP22.8■■□□□ 1.24
SHANK1-203ENST00000391813 TFIP11Q9UBB9 837 aaKnown RBP22.8■■□□□ 1.24
SHANK1-203ENST00000391813 TRPM2O94759 1503 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 C8orf76Q96K31 380 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 GNG11P61952 73 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 PAFAH1B1P43034 410 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 TUBB4BP68371 445 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 GPATCH11Q8N954 259 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 CCDC43Q96MW1 224 aaKnown RBP22.79■■□□□ 1.24
SHANK1-203ENST00000391813 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 MNAT1P51948 309 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 LARP1Q6PKG0 1096 aaKnown RBP22.79■■□□□ 1.24
SHANK1-203ENST00000391813 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 ZNF445P59923 1031 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 GABPB1Q06547 395 aaPredicted RBP22.78■■□□□ 1.24
SHANK1-203ENST00000391813 INTS4Q96HW7 963 aaKnown RBP22.78■■□□□ 1.24
SHANK1-203ENST00000391813 THUMPD2Q9BTF0 503 aaKnown RBP22.78■■□□□ 1.24
SHANK1-203ENST00000391813 MPRIPQ6WCQ1 1025 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 TAX1BP1Q86VP1 789 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 MYRIPQ8NFW9 859 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 ABCA8O94911 1581 aa22.77■■□□□ 1.24
SHANK1-203ENST00000391813 SDSP20132 328 aa22.77■■□□□ 1.24
SHANK1-203ENST00000391813 SYCP1Q15431 976 aa22.77■■□□□ 1.24
SHANK1-203ENST00000391813 ZFYVE27Q5T4F4 411 aa22.77■■□□□ 1.23
SHANK1-203ENST00000391813 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
SHANK1-203ENST00000391813 SEC24BO95487 1268 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 NEFHP12036 1026 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 CHRNA2Q15822 529 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 TANGO6Q9C0B7 1094 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 RAD21O60216 631 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 ANO6Q4KMQ2 910 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 MCM10Q7L590 875 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 DYDC1Q8WWB3 177 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms