RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 BABAM1Q9NWV8 329 aa14.14□□□□□ -0.15
RAPGEF3-201ENST00000389212 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF3-201ENST00000389212 KCNH5Q8NCM2 988 aa14.14□□□□□ -0.15
RAPGEF3-201ENST00000389212 NFAT5O94916 1531 aa14.13□□□□□ -0.15
RAPGEF3-201ENST00000389212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-201ENST00000389212 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
RAPGEF3-201ENST00000389212 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-201ENST00000389212 PRIM1P49642 420 aaKnown RBP14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 ARHGEF25Q86VW2 580 aa14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 RAB11FIP3O75154 756 aa14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 TMEM63CQ9P1W3 806 aa14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 GIGYF1O75420 1035 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 RBSNQ9H1K0 784 aa14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 TMEM51Q9NW97 253 aa14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
RAPGEF3-201ENST00000389212 SYCE3A1L190 88 aa14.11□□□□□ -0.15
RAPGEF3-201ENST00000389212 SECISBP2LQ93073 1101 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-201ENST00000389212 SIL1Q9H173 461 aa14.11□□□□□ -0.15
RAPGEF3-201ENST00000389212 MYL6BP14649 208 aa14.11□□□□□ -0.15
RAPGEF3-201ENST00000389212 KLHDC4Q8TBB5 520 aa14.11□□□□□ -0.15
RAPGEF3-201ENST00000389212 PXDNLA1KZ92 1463 aa14.11□□□□□ -0.15
RAPGEF3-201ENST00000389212 SGSM2O43147 1006 aa14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 CACNA1FO60840 1977 aa14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 HSPA4P34932 840 aa14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 CNTROBQ8N137 903 aa14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 TUBGCP6Q96RT7 1819 aa14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 SNX14Q9Y5W7 946 aa14.1□□□□□ -0.15
RAPGEF3-201ENST00000389212 ADGRL3Q9HAR2 1447 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 BRD1O95696 1058 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 CUL4AQ13619 759 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 SUCLG2Q96I99 432 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 CCDC8Q9H0W5 538 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 ANAPC15P60006 121 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 LSG1Q9H089 658 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 PTH1RQ03431 593 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 ZNF771Q7L3S4 317 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 AACSQ86V21 672 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 CLASRPQ8N2M8 674 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 NLRP2Q9NX02 1062 aa14.09□□□□□ -0.15
RAPGEF3-201ENST00000389212 RAD50Q92878 1312 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 AMOTQ4VCS5 1084 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 KSR2Q6VAB6 950 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 CABLES1Q8TDN4 633 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 AOX1Q06278 1338 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 GADD45BO75293 160 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 HOXB7P09629 217 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 MCM2P49736 904 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 ZNF445P59923 1031 aa14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 PROSER2Q86WR7 435 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-201ENST00000389212 IFIT2P09913 472 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 BRD2P25440 801 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 AK2P54819 239 aa14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 TLR7Q9NYK1 1049 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 COL9A3Q14050 684 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 LARGE1O95461 756 aa14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 CASTP20810 708 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 DMTNQ08495 405 aa14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 ADCK5Q3MIX3 580 aa14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 PRPF40BQ6NWY9 871 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 ZBTB9Q96C00 473 aa14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 KAZALD1Q96I82 304 aa14.07□□□□□ -0.16
RAPGEF3-201ENST00000389212 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-201ENST00000389212 CHRNA2Q15822 529 aa14.06□□□□□ -0.16
RAPGEF3-201ENST00000389212 RUFY3Q7L099 469 aa14.06□□□□□ -0.16
RAPGEF3-201ENST00000389212 RIC3Q7Z5B4 369 aa14.06□□□□□ -0.16
RAPGEF3-201ENST00000389212 GLRX3O76003 335 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 APPP05067 770 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 FAM227BQ96M60 508 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 GRM8O00222 908 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 CCDC173Q0VFZ6 552 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 HSP90AB4PQ58FF6 505 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 BOLA2Q9H3K6 86 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 IRX3P78415 501 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 EAF2Q96CJ1 260 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-201ENST00000389212 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 SASH1O94885 1247 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 TCEANC2Q96MN5 208 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 JAKMIP1Q96N16 626 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 NDUFB9Q9Y6M9 179 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 IGKV5-2P06315 115 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 CSB-PGBD3P0DP91 1061 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 PDIA6Q15084 440 aa14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 INTS4Q96HW7 963 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-201ENST00000389212 EPHA10Q5JZY3 1008 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 CCDC83Q8IWF9 413 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms