RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 IGSF3O75054 1194 aa14.27□□□□□ -0.13
SRGAP3-202ENST00000383836 NAP1L3Q99457 506 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 BIN1O00499 593 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 BMP2KLQ5H9B9 411 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 SYTL4Q96C24 671 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 TTC12Q9H892 705 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 TMCO5BA8MYB1 307 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 KANK3Q6NY19 840 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 TUBBP07437 444 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 KIF1BPQ96EK5 621 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 RBM28Q9NW13 759 aaKnown RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 CTCFLQ8NI51 663 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 TTC14Q96N46 770 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 EIF2AK4Q9P2K8 1649 aaKnown RBP14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 FAM76AQ8TAV0 307 aa14.26□□□□□ -0.13
SRGAP3-202ENST00000383836 CCDC186Q7Z3E2 898 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 CTAGE1Q96RT6 745 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 GTF3C6Q969F1 213 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 PRIM1P49642 420 aaKnown RBP14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 CCDC50Q8IVM0 306 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
SRGAP3-202ENST00000383836 GOLIM4O00461 696 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 VGLL3A8MV65 326 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 HOMER2Q9NSB8 354 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 ANKRD30BQ9BXX2 1392 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 SETD1BQ9UPS6 1966 aaKnown RBP14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 PAIP2Q9BPZ3 127 aaKnown RBP14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 ALDH1L2Q3SY69 923 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 NEBLO76041 1014 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
SRGAP3-202ENST00000383836 MTIF2P46199 727 aaKnown RBP14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 RARSP54136 660 aaKnown RBP14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 TERF1P54274 439 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 IKBKGQ9Y6K9 419 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 ZEB2O60315 1214 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 ZSCAN22P10073 491 aaPredicted RBP14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 CCDC96Q2M329 555 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 DRC1Q96MC2 740 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 PYM1Q9BRP8 204 aaKnown RBP14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 SYT1P21579 422 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 NOP2P46087 812 aaKnown RBP14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 KIAA0753Q2KHM9 967 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 MYO10Q9HD67 2058 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 MXRA7P84157 204 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 CPLX4Q7Z7G2 160 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 MACROD2A1Z1Q3 448 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 RASAL2Q9UJF2 1139 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 ADGBQ8N7X0 1667 aa14.23□□□□□ -0.13
SRGAP3-202ENST00000383836 LACTBP83111 547 aaPredicted RBP14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 SELENOOQ9BVL4 669 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 ATP11AP98196 1134 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 TRIM21P19474 475 aaKnown RBP14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 USP48Q86UV5 1035 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 KIAA1107Q9UPP5 1409 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 CLNS1AP54105 237 aaKnown RBP14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 ATP2B2Q01814 1243 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 DDX23Q9BUQ8 820 aaKnown RBP14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 STIM2Q9P246 746 aa14.22□□□□□ -0.13
SRGAP3-202ENST00000383836 NOL3O60936 208 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 SERPINA10Q9UK55 444 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 GPRASP1Q5JY77 1395 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 FERP16591 822 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 CYLC1P35663 651 aaPredicted RBP14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 KIF3CO14782 793 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 SMARCA5O60264 1052 aaPredicted RBP14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 CTNNA2P26232 953 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 MIPOL1Q8TD10 442 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 RAB34Q9BZG1 259 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 SAMD15Q9P1V8 674 aa14.21□□□□□ -0.13
SRGAP3-202ENST00000383836 MYRIPQ8NFW9 859 aa14.21□□□□□ -0.14
SRGAP3-202ENST00000383836 SREK1Q8WXA9 508 aaKnown RBP14.21□□□□□ -0.14
SRGAP3-202ENST00000383836 SNX21Q969T3 373 aa14.21□□□□□ -0.14
SRGAP3-202ENST00000383836 HFM1A2PYH4 1435 aa14.21□□□□□ -0.14
SRGAP3-202ENST00000383836 SMC6Q96SB8 1091 aa14.21□□□□□ -0.14
SRGAP3-202ENST00000383836 DNAJC21Q5F1R6 531 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 ERO1AQ96HE7 468 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 CCDC102BQ68D86 513 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 CNPY2Q9Y2B0 182 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 A6NNZ2 444 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms