RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 NPHP1O15259 732 aa23.85■■□□□ 1.41
RPUSD3-201ENST00000383820 C21orf2O43822 256 aa23.85■■□□□ 1.41
RPUSD3-201ENST00000383820 STYK1Q6J9G0 422 aa23.85■■□□□ 1.41
RPUSD3-201ENST00000383820 DPY19L2Q6NUT2 758 aa23.85■■□□□ 1.41
RPUSD3-201ENST00000383820 MCM10Q7L590 875 aa23.84■■□□□ 1.41
RPUSD3-201ENST00000383820 CCDC24Q8N4L8 307 aa23.84■■□□□ 1.41
RPUSD3-201ENST00000383820 JMYQ8N9B5 988 aa23.84■■□□□ 1.41
RPUSD3-201ENST00000383820 ZNF652Q9Y2D9 606 aa23.84■■□□□ 1.41
RPUSD3-201ENST00000383820 SRGNP10124 158 aa23.83■■□□□ 1.41
RPUSD3-201ENST00000383820 SOGA3Q5TF21 947 aa23.83■■□□□ 1.41
RPUSD3-201ENST00000383820 ARFGEF2Q9Y6D5 1785 aa23.83■■□□□ 1.4
RPUSD3-201ENST00000383820 HTRA3P83110 453 aa23.82■■□□□ 1.4
RPUSD3-201ENST00000383820 MASTLQ96GX5 879 aa23.82■■□□□ 1.4
RPUSD3-201ENST00000383820 PRAMEF22A3QJZ6 481 aa23.81■■□□□ 1.4
RPUSD3-201ENST00000383820 ERFEQ4G0M1 354 aa23.81■■□□□ 1.4
RPUSD3-201ENST00000383820 TAOK3Q9H2K8 898 aa23.81■■□□□ 1.4
RPUSD3-201ENST00000383820 SLX4Q8IY92 1834 aa23.8■■□□□ 1.4
RPUSD3-201ENST00000383820 PIP4K2AP48426 406 aaPredicted RBP23.8■■□□□ 1.4
RPUSD3-201ENST00000383820 TAF7Q15545 349 aaPredicted RBP23.8■■□□□ 1.4
RPUSD3-201ENST00000383820 PRPF40BQ6NWY9 871 aaKnown RBP23.8■■□□□ 1.4
RPUSD3-201ENST00000383820 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
RPUSD3-201ENST00000383820 ZNF219Q9P2Y4 722 aaPredicted RBP23.8■■□□□ 1.4
RPUSD3-201ENST00000383820 POTECB2RU33 542 aa23.78■■□□□ 1.4
RPUSD3-201ENST00000383820 DCTN1Q14203 1278 aa23.78■■□□□ 1.4
RPUSD3-201ENST00000383820 CACNA1SQ13698 1873 aa23.78■■□□□ 1.4
RPUSD3-201ENST00000383820 NBPF26B4DH59 902 aa23.77■■□□□ 1.4
RPUSD3-201ENST00000383820 NEFMP07197 916 aa23.77■■□□□ 1.4
RPUSD3-201ENST00000383820 NBPF10Q6P3W6 841 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-201ENST00000383820 TPTE2Q6XPS3 522 aa23.77■■□□□ 1.4
RPUSD3-201ENST00000383820 NBPF15Q8N660 670 aa23.77■■□□□ 1.4
RPUSD3-201ENST00000383820 KLRG2A4D1S0 409 aaPredicted RBP23.76■■□□□ 1.39
RPUSD3-201ENST00000383820 LAMB4A4D0S4 1761 aa23.75■■□□□ 1.39
RPUSD3-201ENST00000383820 NPR1P16066 1061 aa23.75■■□□□ 1.39
RPUSD3-201ENST00000383820 PNISRQ8TF01 805 aaKnown RBP23.75■■□□□ 1.39
RPUSD3-201ENST00000383820 NIP7Q9Y221 180 aaKnown RBP eCLIP23.75■■□□□ 1.39
RPUSD3-201ENST00000383820 C7orf43Q8WVR3 580 aa23.74■■□□□ 1.39
RPUSD3-201ENST00000383820 CCDC93Q567U6 631 aa23.73■■□□□ 1.39
RPUSD3-201ENST00000383820 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
RPUSD3-201ENST00000383820 KDM3BQ7LBC6 1761 aa23.71■■□□□ 1.39
RPUSD3-201ENST00000383820 MIS18AQ9NYP9 233 aa23.7■■□□□ 1.38
RPUSD3-201ENST00000383820 ERVV-1B6SEH8 477 aa23.69■■□□□ 1.38
RPUSD3-201ENST00000383820 DDNO94850 711 aaPredicted RBP23.69■■□□□ 1.38
RPUSD3-201ENST00000383820 HLFQ16534 295 aa23.69■■□□□ 1.38
RPUSD3-201ENST00000383820 PLEKHF1Q96S99 279 aa23.69■■□□□ 1.38
RPUSD3-201ENST00000383820 ALDH1B1P30837 517 aa23.68■■□□□ 1.38
RPUSD3-201ENST00000383820 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.38
RPUSD3-201ENST00000383820 CHADLQ6NUI6 762 aa23.68■■□□□ 1.38
RPUSD3-201ENST00000383820 PNNQ9H307 717 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-201ENST00000383820 IQCA1LA6NCM1 817 aa23.67■■□□□ 1.38
RPUSD3-201ENST00000383820 NFE2L2Q16236 605 aa23.67■■□□□ 1.38
RPUSD3-201ENST00000383820 RTKN2Q8IZC4 609 aa23.67■■□□□ 1.38
RPUSD3-201ENST00000383820 L3MBTL3Q96JM7 780 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-201ENST00000383820 NYXQ9GZU5 481 aa23.67■■□□□ 1.38
RPUSD3-201ENST00000383820 SCN4AP35499 1836 aa23.66■■□□□ 1.38
RPUSD3-201ENST00000383820 GTF2E1P29083 439 aaPredicted RBP23.66■■□□□ 1.38
RPUSD3-201ENST00000383820 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
RPUSD3-201ENST00000383820 FAM177BA6PVY3 158 aa23.65■■□□□ 1.38
RPUSD3-201ENST00000383820 NUP98P52948 1817 aa23.65■■□□□ 1.38
RPUSD3-201ENST00000383820 MAP3K15Q6ZN16 1313 aa23.64■■□□□ 1.38
RPUSD3-201ENST00000383820 CRY2Q49AN0 593 aa23.63■■□□□ 1.37
RPUSD3-201ENST00000383820 RIC1Q4ADV7 1423 aa23.63■■□□□ 1.37
RPUSD3-201ENST00000383820 KIF6Q6ZMV9 814 aa23.63■■□□□ 1.37
RPUSD3-201ENST00000383820 CREBZFQ9NS37 354 aa23.63■■□□□ 1.37
RPUSD3-201ENST00000383820 IBTKQ9P2D0 1353 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-201ENST00000383820 ERBB4Q15303 1308 aa23.62■■□□□ 1.37
RPUSD3-201ENST00000383820 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
RPUSD3-201ENST00000383820 COL13A1Q5TAT6 717 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-201ENST00000383820 ZNF277Q9NRM2 450 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-201ENST00000383820 LDHDQ86WU2 507 aa23.61■■□□□ 1.37
RPUSD3-201ENST00000383820 NGEFQ8N5V2 710 aa23.61■■□□□ 1.37
RPUSD3-201ENST00000383820 TAF1DQ9H5J8 278 aaPredicted RBP23.61■■□□□ 1.37
RPUSD3-201ENST00000383820 RRP7AQ9Y3A4 280 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-201ENST00000383820 POTEIP0CG38 1075 aa23.6■■□□□ 1.37
RPUSD3-201ENST00000383820 POTEJP0CG39 1038 aa23.6■■□□□ 1.37
RPUSD3-201ENST00000383820 CC2D2BQ6DHV5 1058 aa23.6■■□□□ 1.37
RPUSD3-201ENST00000383820 TTLL7Q6ZT98 887 aa23.6■■□□□ 1.37
RPUSD3-201ENST00000383820 ABCC12Q96J65 1359 aa23.6■■□□□ 1.37
RPUSD3-201ENST00000383820 IARSP41252 1262 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-201ENST00000383820 OLFM4Q6UX06 510 aa23.59■■□□□ 1.37
RPUSD3-201ENST00000383820 PSMD1Q99460 953 aa23.59■■□□□ 1.37
RPUSD3-201ENST00000383820 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-201ENST00000383820 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
RPUSD3-201ENST00000383820 FZD9O00144 591 aa23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 HSPA1AP0DMV8 641 aaKnown RBP23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 HSPA1BP0DMV9 641 aaKnown RBP23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 MYL6BP14649 208 aa23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 GRIPAP1Q4V328 841 aa23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 NUTM1Q86Y26 1132 aa23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 SYNE4Q8N205 404 aa23.58■■□□□ 1.37
RPUSD3-201ENST00000383820 ZNF541Q9H0D2 1346 aa23.58■■□□□ 1.36
RPUSD3-201ENST00000383820 HACL1Q9UJ83 578 aa23.57■■□□□ 1.36
RPUSD3-201ENST00000383820 UBN2Q6ZU65 1347 aa23.57■■□□□ 1.36
RPUSD3-201ENST00000383820 PASKQ96RG2 1323 aa23.57■■□□□ 1.36
RPUSD3-201ENST00000383820 GIGYF2Q6Y7W6 1299 aaKnown RBP23.56■■□□□ 1.36
RPUSD3-201ENST00000383820 ZNF34Q8IZ26 560 aa23.56■■□□□ 1.36
RPUSD3-201ENST00000383820 RPGRQ92834 1020 aaKnown RBP23.56■■□□□ 1.36
RPUSD3-201ENST00000383820 ZBTB3Q9H5J0 574 aa23.56■■□□□ 1.36
RPUSD3-201ENST00000383820 BABAM1Q9NWV8 329 aa23.56■■□□□ 1.36
RPUSD3-201ENST00000383820 SUSD4Q5VX71 490 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms