RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SLC39A6Q13433 755 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 RBSNQ9H1K0 784 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
GPNMB-202ENST00000381990 ADCY9O60503 1353 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 IL2RBP14784 551 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 NCLP19338 710 aaKnown RBP10.84□□□□□ -0.67
GPNMB-202ENST00000381990 CABP4P57796 275 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 EVA1CP58658 441 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 ATP8B2P98198 1209 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 BEND3Q5T5X7 828 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
GPNMB-202ENST00000381990 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 LRRFIP2Q9Y608 721 aaKnown RBP10.84□□□□□ -0.67
GPNMB-202ENST00000381990 C5P01031 1676 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 ROBO1Q9Y6N7 1651 aa10.84□□□□□ -0.67
GPNMB-202ENST00000381990 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
GPNMB-202ENST00000381990 PROSER3Q2NL68 480 aa10.83□□□□□ -0.68
GPNMB-202ENST00000381990 KSR2Q6VAB6 950 aa10.83□□□□□ -0.68
GPNMB-202ENST00000381990 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
GPNMB-202ENST00000381990 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
GPNMB-202ENST00000381990 MCM2P49736 904 aa10.83□□□□□ -0.68
GPNMB-202ENST00000381990 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
GPNMB-202ENST00000381990 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
GPNMB-202ENST00000381990 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
GPNMB-202ENST00000381990 R3HCC1Q9Y3T6 440 aaKnown RBP10.83□□□□□ -0.68
GPNMB-202ENST00000381990 LTBP4Q8N2S1 1624 aa10.83□□□□□ -0.68
GPNMB-202ENST00000381990 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
GPNMB-202ENST00000381990 PDIA6Q15084 440 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 PRPF40AO75400 957 aaKnown RBP10.82□□□□□ -0.68
GPNMB-202ENST00000381990 ALDH1L1O75891 902 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 DDX58O95786 925 aaKnown RBP10.82□□□□□ -0.68
GPNMB-202ENST00000381990 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
GPNMB-202ENST00000381990 GPT2Q8TD30 523 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 MAP3K2Q9Y2U5 619 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 UQCRHLA0A096LP55 91 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 PNMA6EA0A0J9YXQ4 647 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 UQCRHP07919 91 aa10.82□□□□□ -0.68
GPNMB-202ENST00000381990 COL22A1Q8NFW1 1626 aaPredicted RBP10.81□□□□□ -0.68
GPNMB-202ENST00000381990 SASS6Q6UVJ0 657 aa10.81□□□□□ -0.68
GPNMB-202ENST00000381990 C16orf71Q8IYS4 520 aaPredicted RBP10.81□□□□□ -0.68
GPNMB-202ENST00000381990 SHANK3Q9BYB0 1731 aa10.81□□□□□ -0.68
GPNMB-202ENST00000381990 COL14A1Q05707 1796 aaKnown RBP10.81□□□□□ -0.68
GPNMB-202ENST00000381990 APBB1O00213 710 aa10.81□□□□□ -0.68
GPNMB-202ENST00000381990 SMARCA5O60264 1052 aaPredicted RBP10.81□□□□□ -0.68
GPNMB-202ENST00000381990 SSH3Q8TE77 659 aa10.81□□□□□ -0.68
GPNMB-202ENST00000381990 SYAP1Q96A49 352 aaPredicted RBP10.81□□□□□ -0.68
GPNMB-202ENST00000381990 ADRA2BP18089 450 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 PKP1Q13835 747 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 EXOC6BQ9Y2D4 811 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 ERC2O15083 957 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 PHF14O94880 888 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
GPNMB-202ENST00000381990 SDSP20132 328 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 LINS1Q8NG48 757 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 OTUD7AQ8TE49 926 aaPredicted RBP10.8□□□□□ -0.68
GPNMB-202ENST00000381990 LRRCC1Q9C099 1032 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 BTG4Q9NY30 223 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 HDAC5Q9UQL6 1122 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 ZDHHC9Q9Y397 364 aa10.8□□□□□ -0.68
GPNMB-202ENST00000381990 POLA2Q14181 598 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 TMEM63CQ9P1W3 806 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 LAMB4A4D0S4 1761 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 GLI3P10071 1580 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 PPP1R42Q7Z4L9 355 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 USP16Q9Y5T5 823 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 UBR2Q8IWV8 1755 aa10.79□□□□□ -0.68
GPNMB-202ENST00000381990 SYCE3A1L190 88 aa10.78□□□□□ -0.68
GPNMB-202ENST00000381990 AIMP1Q12904 312 aaKnown RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 ZGPATQ8N5A5 531 aaKnown RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
GPNMB-202ENST00000381990 DDX54Q8TDD1 881 aaKnown RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 C9orf78Q9NZ63 289 aaPredicted RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 MYL6BP14649 208 aa10.78□□□□□ -0.68
GPNMB-202ENST00000381990 RBM10P98175 930 aaKnown RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 RIC3Q7Z5B4 369 aa10.78□□□□□ -0.68
GPNMB-202ENST00000381990 XAGE3Q8WTP9 111 aa10.78□□□□□ -0.68
GPNMB-202ENST00000381990 COL16A1Q07092 1604 aaPredicted RBP10.78□□□□□ -0.68
GPNMB-202ENST00000381990 PAPPAQ13219 1627 aa10.78□□□□□ -0.68
GPNMB-202ENST00000381990 RAB11FIP3O75154 756 aa10.77□□□□□ -0.68
GPNMB-202ENST00000381990 KIAA2012Q0VF49 1180 aa10.77□□□□□ -0.68
GPNMB-202ENST00000381990 MTX1Q13505 466 aa10.77□□□□□ -0.68
GPNMB-202ENST00000381990 LRP10Q7Z4F1 713 aa10.77□□□□□ -0.68
GPNMB-202ENST00000381990 SMAP1Q8IYB5 467 aaPredicted RBP10.77□□□□□ -0.68
GPNMB-202ENST00000381990 UTYO14607 1347 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 SRGAP3O43295 1099 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 BRD1O95696 1058 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 PDE1AP54750 535 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 CWF19L2Q2TBE0 894 aaKnown RBP10.77□□□□□ -0.69
GPNMB-202ENST00000381990 COPS6Q7L5N1 327 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
GPNMB-202ENST00000381990 SALL3Q9BXA9 1300 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 GRM8O00222 908 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms