RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 CD2BP2O95400 341 aaKnown RBP14.73□□□□□ -0.05
USP3-202ENST00000380324 GCKRQ14397 625 aa14.73□□□□□ -0.05
USP3-202ENST00000380324 HSP90AB4PQ58FF6 505 aa14.73□□□□□ -0.05
USP3-202ENST00000380324 UNC5CLQ8IV45 518 aa14.73□□□□□ -0.05
USP3-202ENST00000380324 JARID2Q92833 1246 aaPredicted RBP14.73□□□□□ -0.05
USP3-202ENST00000380324 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
USP3-202ENST00000380324 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
USP3-202ENST00000380324 UTYO14607 1347 aa14.73□□□□□ -0.05
USP3-202ENST00000380324 ATP5J2-PTCD1G3V325 749 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 FRAT2O75474 233 aaPredicted RBP14.72□□□□□ -0.05
USP3-202ENST00000380324 MAP4K4O95819 1239 aaPredicted RBP14.72□□□□□ -0.05
USP3-202ENST00000380324 USP26Q9BXU7 913 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
USP3-202ENST00000380324 ITGB4P16144 1822 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 NBPF26B4DH59 902 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 ERC2O15083 957 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 EIF5BO60841 1220 aaKnown RBP14.72□□□□□ -0.05
USP3-202ENST00000380324 REC8O95072 547 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 NBPF14Q5TI25 921 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 NBPF10Q6P3W6 841 aaKnown RBP14.72□□□□□ -0.05
USP3-202ENST00000380324 NBPF15Q8N660 670 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
USP3-202ENST00000380324 LTBP4Q8N2S1 1624 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 TNS2Q63HR2 1409 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 NUP188Q5SRE5 1749 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 A1BGP04217 495 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 UBE3BQ7Z3V4 1068 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 SNX21Q969T3 373 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 SIL1Q9H173 461 aa14.71□□□□□ -0.05
USP3-202ENST00000380324 AOX1Q06278 1338 aa14.71□□□□□ -0.06
USP3-202ENST00000380324 PHLPP1O60346 1717 aa14.71□□□□□ -0.06
USP3-202ENST00000380324 PI4K2BQ8TCG2 481 aa14.7□□□□□ -0.06
USP3-202ENST00000380324 PLCH1Q4KWH8 1693 aa14.7□□□□□ -0.06
USP3-202ENST00000380324 EPHA10Q5JZY3 1008 aa14.7□□□□□ -0.06
USP3-202ENST00000380324 CLASRPQ8N2M8 674 aaKnown RBP14.7□□□□□ -0.06
USP3-202ENST00000380324 KLHDC4Q8TBB5 520 aa14.7□□□□□ -0.06
USP3-202ENST00000380324 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
USP3-202ENST00000380324 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
USP3-202ENST00000380324 ADAMTS2O95450 1211 aa14.69□□□□□ -0.06
USP3-202ENST00000380324 TTLL7Q6ZT98 887 aa14.69□□□□□ -0.06
USP3-202ENST00000380324 PLBD2Q8NHP8 589 aa14.69□□□□□ -0.06
USP3-202ENST00000380324 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
USP3-202ENST00000380324 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
USP3-202ENST00000380324 DISP2A7MBM2 1401 aa14.68□□□□□ -0.06
USP3-202ENST00000380324 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
USP3-202ENST00000380324 CHMLP26374 656 aa14.68□□□□□ -0.06
USP3-202ENST00000380324 DEKP35659 375 aaKnown RBP14.68□□□□□ -0.06
USP3-202ENST00000380324 ERC1Q8IUD2 1116 aa14.68□□□□□ -0.06
USP3-202ENST00000380324 ZBTB3Q9H5J0 574 aa14.68□□□□□ -0.06
USP3-202ENST00000380324 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
USP3-202ENST00000380324 A0A087WZG4 1122 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.67□□□□□ -0.06
USP3-202ENST00000380324 K7ELQ4 463 aaPredicted RBP14.67□□□□□ -0.06
USP3-202ENST00000380324 RABEP1Q15276 862 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 AACSQ86V21 672 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 PIGBQ92521 554 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 ANO2Q9NQ90 1003 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 TJP1Q07157 1748 aa14.67□□□□□ -0.06
USP3-202ENST00000380324 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
USP3-202ENST00000380324 G3BP1Q13283 466 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP3-202ENST00000380324 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
USP3-202ENST00000380324 SASH1O94885 1247 aa14.66□□□□□ -0.06
USP3-202ENST00000380324 IL25Q9H293 177 aa14.66□□□□□ -0.06
USP3-202ENST00000380324 CNTROBQ8N137 903 aa14.65□□□□□ -0.06
USP3-202ENST00000380324 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
USP3-202ENST00000380324 DOT1LQ8TEK3 1739 aa14.65□□□□□ -0.06
USP3-202ENST00000380324 PIP4K2BP78356 416 aa14.65□□□□□ -0.06
USP3-202ENST00000380324 GPATCH3Q96I76 525 aa14.65□□□□□ -0.06
USP3-202ENST00000380324 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 DNAJC10Q8IXB1 793 aa14.64□□□□□ -0.07
USP3-202ENST00000380324 TLR7Q9NYK1 1049 aaKnown RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
USP3-202ENST00000380324 USP42Q9H9J4 1324 aaKnown RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 NRAPQ86VF7 1730 aa14.64□□□□□ -0.07
USP3-202ENST00000380324 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 CCDC8Q9H0W5 538 aaPredicted RBP14.64□□□□□ -0.07
USP3-202ENST00000380324 ECHDC1Q9NTX5 307 aa14.64□□□□□ -0.07
USP3-202ENST00000380324 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
USP3-202ENST00000380324 A0A0G2JS52 829 aa14.63□□□□□ -0.07
USP3-202ENST00000380324 EAF2Q96CJ1 260 aaPredicted RBP14.63□□□□□ -0.07
USP3-202ENST00000380324 ATG3Q9NT62 314 aa14.63□□□□□ -0.07
USP3-202ENST00000380324 ARXQ96QS3 562 aa14.63□□□□□ -0.07
USP3-202ENST00000380324 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
USP3-202ENST00000380324 EXOC5O00471 708 aa14.62□□□□□ -0.07
USP3-202ENST00000380324 CASP7P55210 303 aa14.62□□□□□ -0.07
USP3-202ENST00000380324 PALD1Q9ULE6 856 aa14.62□□□□□ -0.07
USP3-202ENST00000380324 BCL9O00512 1426 aa14.62□□□□□ -0.07
USP3-202ENST00000380324 RABL6Q3YEC7 729 aaPredicted RBP14.61□□□□□ -0.07
USP3-202ENST00000380324 LRP6O75581 1613 aa14.61□□□□□ -0.07
USP3-202ENST00000380324 ST18O60284 1047 aa14.61□□□□□ -0.07
USP3-202ENST00000380324 MCCP23508 829 aa14.61□□□□□ -0.07
USP3-202ENST00000380324 PTPN12Q05209 780 aaKnown RBP14.61□□□□□ -0.07
USP3-202ENST00000380324 LMBR1LQ6UX01 489 aa14.61□□□□□ -0.07
USP3-202ENST00000380324 CWC27Q6UX04 472 aaKnown RBP14.61□□□□□ -0.07
USP3-202ENST00000380324 RFX5P48382 616 aaPredicted RBP14.6□□□□□ -0.07
USP3-202ENST00000380324 COL15A1P39059 1388 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms