RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 EIF4A2Q14240 407 aaKnown RBP14.38□□□□□ -0.11
HERC6-203ENST00000380265 CCDC144BQ3MJ40 725 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 CCDC144CPQ8IYA2 1237 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 USP27XA6NNY8 438 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 PPP1R42Q7Z4L9 355 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 ME3Q16798 604 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 RHPN1Q8TCX5 695 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 SH2B1Q9NRF2 756 aaPredicted RBP14.37□□□□□ -0.11
HERC6-203ENST00000380265 USP16Q9Y5T5 823 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
HERC6-203ENST00000380265 ABCC3O15438 1527 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 LSG1Q9H089 658 aaKnown RBP14.37□□□□□ -0.11
HERC6-203ENST00000380265 STAP2Q9UGK3 403 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
HERC6-203ENST00000380265 FBXO38Q6PIJ6 1188 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 DDX19AQ9NUU7 478 aaKnown RBP14.37□□□□□ -0.11
HERC6-203ENST00000380265 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
HERC6-203ENST00000380265 H3BQV1 296 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 PDCP20941 246 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 IFFO2Q5TF58 517 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 SCAND2PQ9GZW5 306 aaPredicted RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 CD163L1Q9NR16 1453 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 SYCP1Q15431 976 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 CCDC30Q5VVM6 783 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 SALL3Q9BXA9 1300 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 NR1I2O75469 434 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 EIF2S2P20042 333 aaKnown RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 PTH1RQ03431 593 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 ZRSR1Q15695 479 aaKnown RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
HERC6-203ENST00000380265 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
HERC6-203ENST00000380265 POLR3GO15318 223 aaPredicted RBP14.35□□□□□ -0.11
HERC6-203ENST00000380265 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
HERC6-203ENST00000380265 A0A087WWV3 80 aa14.35□□□□□ -0.11
HERC6-203ENST00000380265 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
HERC6-203ENST00000380265 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
HERC6-203ENST00000380265 CCDC171Q6TFL3 1326 aa14.35□□□□□ -0.11
HERC6-203ENST00000380265 HSP90B1P14625 803 aaKnown RBP14.35□□□□□ -0.11
HERC6-203ENST00000380265 TNNT3P45378 269 aaPredicted RBP14.35□□□□□ -0.11
HERC6-203ENST00000380265 HOMER1Q86YM7 354 aa14.35□□□□□ -0.11
HERC6-203ENST00000380265 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
HERC6-203ENST00000380265 SOS1Q07889 1333 aaPredicted RBP14.35□□□□□ -0.11
HERC6-203ENST00000380265 SLU7O95391 586 aaKnown RBP14.34□□□□□ -0.11
HERC6-203ENST00000380265 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
HERC6-203ENST00000380265 VPS53Q5VIR6 699 aa14.34□□□□□ -0.11
HERC6-203ENST00000380265 LRRC8AQ8IWT6 810 aa14.34□□□□□ -0.11
HERC6-203ENST00000380265 KIF1BPQ96EK5 621 aa14.34□□□□□ -0.11
HERC6-203ENST00000380265 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
HERC6-203ENST00000380265 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
HERC6-203ENST00000380265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.34□□□□□ -0.11
HERC6-203ENST00000380265 NPHP3Q7Z494 1330 aa14.34□□□□□ -0.11
HERC6-203ENST00000380265 KIAA0232Q92628 1395 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 RAPGEF3O95398 923 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 ERO1AQ96HE7 468 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 CLSTN2Q9H4D0 955 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 TPCN1Q9ULQ1 816 aa14.33□□□□□ -0.11
HERC6-203ENST00000380265 CPSF1Q10570 1443 aaKnown RBP14.33□□□□□ -0.11
HERC6-203ENST00000380265 ERCC6LQ2NKX8 1250 aa14.33□□□□□ -0.12
HERC6-203ENST00000380265 PAXIP1Q6ZW49 1069 aaPredicted RBP14.33□□□□□ -0.12
HERC6-203ENST00000380265 PLA2G4DQ86XP0 818 aa14.33□□□□□ -0.12
HERC6-203ENST00000380265 LEO1Q8WVC0 666 aaPredicted RBP14.33□□□□□ -0.12
HERC6-203ENST00000380265 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.12
HERC6-203ENST00000380265 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
HERC6-203ENST00000380265 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.12
HERC6-203ENST00000380265 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.12
HERC6-203ENST00000380265 IFIT2P09913 472 aaKnown RBP14.33□□□□□ -0.12
HERC6-203ENST00000380265 BLOC1S2Q6QNY1 142 aa14.32□□□□□ -0.12
HERC6-203ENST00000380265 TDRD7Q8NHU6 1098 aaKnown RBP14.32□□□□□ -0.12
HERC6-203ENST00000380265 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
HERC6-203ENST00000380265 POGZQ7Z3K3 1410 aa14.32□□□□□ -0.12
HERC6-203ENST00000380265 BMS1Q14692 1282 aaKnown RBP14.32□□□□□ -0.12
HERC6-203ENST00000380265 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
HERC6-203ENST00000380265 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
HERC6-203ENST00000380265 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
HERC6-203ENST00000380265 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
HERC6-203ENST00000380265 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
HERC6-203ENST00000380265 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
HERC6-203ENST00000380265 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
HERC6-203ENST00000380265 PI4K2BQ8TCG2 481 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
HERC6-203ENST00000380265 PPLO60437 1756 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 NRDCO43847 1150 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 GLRX3O76003 335 aaKnown RBP14.31□□□□□ -0.12
HERC6-203ENST00000380265 SMC2O95347 1197 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 SNW1Q13573 536 aaKnown RBP14.31□□□□□ -0.12
HERC6-203ENST00000380265 PPFIA3O75145 1194 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 SYT10Q6XYQ8 523 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 CCDC73Q6ZRK6 1079 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 GPATCH3Q96I76 525 aa14.31□□□□□ -0.12
HERC6-203ENST00000380265 PSMA5P28066 241 aa14.3□□□□□ -0.12
HERC6-203ENST00000380265 DNAJC2Q99543 621 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms