RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.32
PCDHGA1-201ENST00000378105 SASS6Q6UVJ0 657 aa13.02□□□□□ -0.32
PCDHGA1-201ENST00000378105 C1orf115Q9H7X2 142 aa13.02□□□□□ -0.32
PCDHGA1-201ENST00000378105 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 MYL6BP14649 208 aa13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 INSRP06213 1382 aa13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 E2F4Q16254 413 aa13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 KIF16BQ96L93 1317 aa13.02□□□□□ -0.33
PCDHGA1-201ENST00000378105 FEZ2Q9UHY8 353 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA1-201ENST00000378105 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
PCDHGA1-201ENST00000378105 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
PCDHGA1-201ENST00000378105 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA1-201ENST00000378105 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
PCDHGA1-201ENST00000378105 A0A1B0GUL6 1792 aa13.01□□□□□ -0.33
PCDHGA1-201ENST00000378105 USP6P35125 1406 aa13□□□□□ -0.33
PCDHGA1-201ENST00000378105 SATB1Q01826 763 aa13□□□□□ -0.33
PCDHGA1-201ENST00000378105 C10orf67Q8IYJ2 551 aa13□□□□□ -0.33
PCDHGA1-201ENST00000378105 ANKRD36BQ8N2N9 1353 aa13□□□□□ -0.33
PCDHGA1-201ENST00000378105 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 SLC20A2Q08357 652 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 NOB1Q9ULX3 412 aaKnown RBP12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 BRCA2P51587 3418 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 PPP2R5AQ15172 486 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 LNPKQ9C0E8 428 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 NPHP3Q7Z494 1330 aa12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA1-201ENST00000378105 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 YY1AP1Q9H869 796 aa12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 RBM5P52756 815 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
PCDHGA1-201ENST00000378105 TOM1O60784 492 aa12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 KIAA1551Q9HCM1 1747 aa12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 TERF1P54274 439 aa12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 NCAPGQ9BPX3 1015 aa12.97□□□□□ -0.33
PCDHGA1-201ENST00000378105 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
PCDHGA1-201ENST00000378105 POLD1P28340 1107 aa12.96□□□□□ -0.34
PCDHGA1-201ENST00000378105 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA1-201ENST00000378105 GCP02774 474 aa12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 MRC1P22897 1456 aa12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 C17orf53Q8N3J3 647 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-201ENST00000378105 G3V3G9 751 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 TRIM66O15016 1216 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 CALCOCO1Q9P1Z2 691 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 DOT1LQ8TEK3 1739 aa12.94□□□□□ -0.34
PCDHGA1-201ENST00000378105 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 SUFUQ9UMX1 484 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 BCORQ6W2J9 1755 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 MAP3K19Q56UN5 1328 aa12.93□□□□□ -0.34
PCDHGA1-201ENST00000378105 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 ANXA1P04083 346 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 CCDC85AQ96PX6 553 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 USP19O94966 1318 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 KDM4AO75164 1064 aa12.92□□□□□ -0.34
PCDHGA1-201ENST00000378105 SLFN14P0C7P3 912 aa12.91□□□□□ -0.34
PCDHGA1-201ENST00000378105 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
PCDHGA1-201ENST00000378105 EFCC1Q9HA90 598 aa12.91□□□□□ -0.34
PCDHGA1-201ENST00000378105 HNRNPH2P55795 449 aaKnown RBP12.91□□□□□ -0.34
PCDHGA1-201ENST00000378105 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCDHGA1-201ENST00000378105 NEUROD6Q96NK8 337 aa12.91□□□□□ -0.34
PCDHGA1-201ENST00000378105 F6X3S4 739 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms