RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 IGKV5-2P06315 115 aa26.49■■□□□ 1.83
RNF38-205ENST00000377877 CRKLP46109 303 aaKnown RBP26.49■■□□□ 1.83
RNF38-205ENST00000377877 SIRT2Q8IXJ6 389 aa26.49■■□□□ 1.83
RNF38-205ENST00000377877 CENPQQ7L2Z9 268 aaPredicted RBP26.48■■□□□ 1.83
RNF38-205ENST00000377877 MYD88Q99836 296 aa26.48■■□□□ 1.83
RNF38-205ENST00000377877 MYH14Q7Z406 1995 aaKnown RBP26.48■■□□□ 1.83
RNF38-205ENST00000377877 LINS1Q8NG48 757 aa26.47■■□□□ 1.83
RNF38-205ENST00000377877 LINC00116Q8NCU8 138 aa26.47■■□□□ 1.83
RNF38-205ENST00000377877 RWDD1Q9H446 243 aaPredicted RBP26.47■■□□□ 1.83
RNF38-205ENST00000377877 ZBTB3Q9H5J0 574 aa26.47■■□□□ 1.83
RNF38-205ENST00000377877 CCDC87Q9NVE4 849 aa26.47■■□□□ 1.83
RNF38-205ENST00000377877 ALDH1L1O75891 902 aa26.46■■□□□ 1.83
RNF38-205ENST00000377877 NBPF7P0C2Y1 421 aaPredicted RBP26.46■■□□□ 1.83
RNF38-205ENST00000377877 HDAC1Q13547 482 aaPredicted RBP26.45■■□□□ 1.82
RNF38-205ENST00000377877 SKAP1Q86WV1 359 aa26.45■■□□□ 1.82
RNF38-205ENST00000377877 ARXQ96QS3 562 aa26.45■■□□□ 1.82
RNF38-205ENST00000377877 ARFGEF2Q9Y6D5 1785 aa26.44■■□□□ 1.82
RNF38-205ENST00000377877 ATP5J2-PTCD1G3V325 749 aa26.44■■□□□ 1.82
RNF38-205ENST00000377877 GNAI3P08754 354 aa26.44■■□□□ 1.82
RNF38-205ENST00000377877 IL6STP40189 918 aaPredicted RBP26.44■■□□□ 1.82
RNF38-205ENST00000377877 CICQ96RK0 1608 aaPredicted RBP26.44■■□□□ 1.82
RNF38-205ENST00000377877 NEURL1BA8MQ27 555 aa26.43■■□□□ 1.82
RNF38-205ENST00000377877 EIF5P55010 431 aaKnown RBP26.43■■□□□ 1.82
RNF38-205ENST00000377877 NEXNQ0ZGT2 675 aa26.43■■□□□ 1.82
RNF38-205ENST00000377877 ILDR1Q86SU0 546 aaPredicted RBP26.43■■□□□ 1.82
RNF38-205ENST00000377877 GNAI2P04899 355 aa26.42■■□□□ 1.82
RNF38-205ENST00000377877 CCNL1Q9UK58 526 aaPredicted RBP26.42■■□□□ 1.82
RNF38-205ENST00000377877 ZNF831Q5JPB2 1677 aa26.42■■□□□ 1.82
RNF38-205ENST00000377877 CEP85Q6P2H3 762 aa26.42■■□□□ 1.82
RNF38-205ENST00000377877 COL5A3P25940 1745 aaPredicted RBP26.42■■□□□ 1.82
RNF38-205ENST00000377877 UBTFL1P0CB47 393 aaPredicted RBP26.41■■□□□ 1.82
RNF38-205ENST00000377877 ERICH6Q7L0X2 663 aa26.41■■□□□ 1.82
RNF38-205ENST00000377877 TBC1D2BQ9UPU7 963 aa26.41■■□□□ 1.82
RNF38-205ENST00000377877 LRRFIP2Q9Y608 721 aaKnown RBP26.41■■□□□ 1.82
RNF38-205ENST00000377877 NUP188Q5SRE5 1749 aa26.41■■□□□ 1.82
RNF38-205ENST00000377877 ANKRD44Q8N8A2 993 aa26.4■■□□□ 1.82
RNF38-205ENST00000377877 LY75O60449 1722 aa26.4■■□□□ 1.82
RNF38-205ENST00000377877 C9orf78Q9NZ63 289 aaPredicted RBP26.4■■□□□ 1.82
RNF38-205ENST00000377877 GCKRQ14397 625 aa26.39■■□□□ 1.82
RNF38-205ENST00000377877 HLFQ16534 295 aa26.39■■□□□ 1.82
RNF38-205ENST00000377877 KIF6Q6ZMV9 814 aa26.38■■□□□ 1.81
RNF38-205ENST00000377877 SMIM5Q71RC9 77 aa26.38■■□□□ 1.81
RNF38-205ENST00000377877 RPAP2Q8IXW5 612 aaPredicted RBP26.38■■□□□ 1.81
RNF38-205ENST00000377877 LRRC4BQ9NT99 713 aa26.38■■□□□ 1.81
RNF38-205ENST00000377877 MAP3K15Q6ZN16 1313 aa26.38■■□□□ 1.81
RNF38-205ENST00000377877 RREB1Q92766 1687 aa26.38■■□□□ 1.81
RNF38-205ENST00000377877 JARID2Q92833 1246 aaPredicted RBP26.38■■□□□ 1.81
RNF38-205ENST00000377877 GRM8O00222 908 aa26.37■■□□□ 1.81
RNF38-205ENST00000377877 DZIP3Q86Y13 1208 aaKnown RBP26.37■■□□□ 1.81
RNF38-205ENST00000377877 TCIRG1Q13488 830 aa26.36■■□□□ 1.81
RNF38-205ENST00000377877 UTYO14607 1347 aa26.36■■□□□ 1.81
RNF38-205ENST00000377877 GIGYF2Q6Y7W6 1299 aaKnown RBP26.35■■□□□ 1.81
RNF38-205ENST00000377877 NPM2Q86SE8 214 aaKnown RBP26.35■■□□□ 1.81
RNF38-205ENST00000377877 SMC5Q8IY18 1101 aa26.35■■□□□ 1.81
RNF38-205ENST00000377877 CNTNAP4Q9C0A0 1308 aa26.35■■□□□ 1.81
RNF38-205ENST00000377877 AFDNP55196 1824 aaKnown RBP26.34■■□□□ 1.81
RNF38-205ENST00000377877 ATP8B2P98198 1209 aa26.34■■□□□ 1.81
RNF38-205ENST00000377877 RC3H1Q5TC82 1133 aaKnown RBP26.34■■□□□ 1.81
RNF38-205ENST00000377877 KAZALD1Q96I82 304 aa26.34■■□□□ 1.81
RNF38-205ENST00000377877 ISCA1Q9BUE6 129 aa26.34■■□□□ 1.81
RNF38-205ENST00000377877 PNMA6EA0A0J9YXQ4 647 aa26.33■■□□□ 1.81
RNF38-205ENST00000377877 PROM2Q8N271 834 aa26.33■■□□□ 1.81
RNF38-205ENST00000377877 TAF1LQ8IZX4 1826 aa26.33■■□□□ 1.81
RNF38-205ENST00000377877 SUCLG2Q96I99 432 aa26.32■■□□□ 1.8
RNF38-205ENST00000377877 PDZRN3Q9UPQ7 1066 aa26.32■■□□□ 1.8
RNF38-205ENST00000377877 A0A087WZG4 1122 aa26.31■■□□□ 1.8
RNF38-205ENST00000377877 ERVV-1B6SEH8 477 aa26.31■■□□□ 1.8
RNF38-205ENST00000377877 AMIGO3Q86WK7 504 aa26.31■■□□□ 1.8
RNF38-205ENST00000377877 IBTKQ9P2D0 1353 aaPredicted RBP26.31■■□□□ 1.8
RNF38-205ENST00000377877 CWC25Q9NXE8 425 aaPredicted RBP26.31■■□□□ 1.8
RNF38-205ENST00000377877 APBA3O96018 575 aa26.3■■□□□ 1.8
RNF38-205ENST00000377877 CCDC191Q8NCU4 936 aa26.3■■□□□ 1.8
RNF38-205ENST00000377877 NUP98P52948 1817 aa26.3■■□□□ 1.8
RNF38-205ENST00000377877 RPS6KA4O75676 772 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 CAMTA2O94983 1202 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 RTL5Q5HYW3 569 aaPredicted RBP26.29■■□□□ 1.8
RNF38-205ENST00000377877 UBE3BQ7Z3V4 1068 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 DCTPP1Q9H773 170 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 COL15A1P39059 1388 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 H7C1W4 665 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 GNPATO15228 680 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 GPTP24298 496 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 CASP7P55210 303 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 TRIM28Q13263 835 aaKnown RBP26.29■■□□□ 1.8
RNF38-205ENST00000377877 PPP1R42Q7Z4L9 355 aa26.29■■□□□ 1.8
RNF38-205ENST00000377877 EPHA10Q5JZY3 1008 aa26.28■■□□□ 1.8
RNF38-205ENST00000377877 TXNRD1Q16881 649 aa26.27■■□□□ 1.8
RNF38-205ENST00000377877 BICC1Q9H694 974 aaKnown RBP26.27■■□□□ 1.8
RNF38-205ENST00000377877 SLC27A3Q5K4L6 730 aa26.26■■□□□ 1.79
RNF38-205ENST00000377877 GCC1Q96CN9 775 aa26.26■■□□□ 1.79
RNF38-205ENST00000377877 PLSCR1O15162 318 aa26.26■■□□□ 1.79
RNF38-205ENST00000377877 SSH3Q8TE77 659 aa26.26■■□□□ 1.79
RNF38-205ENST00000377877 HMMRO75330 724 aa26.25■■□□□ 1.79
RNF38-205ENST00000377877 HSP90AB3PQ58FF7 597 aa26.25■■□□□ 1.79
RNF38-205ENST00000377877 NLRP10Q86W26 655 aa26.25■■□□□ 1.79
RNF38-205ENST00000377877 ZNF34Q8IZ26 560 aa26.25■■□□□ 1.79
RNF38-205ENST00000377877 C4BP0C0L5 1744 aa26.25■■□□□ 1.79
RNF38-205ENST00000377877 RGS3P49796 1198 aa26.24■■□□□ 1.79
RNF38-205ENST00000377877 RTCBQ9Y3I0 505 aaKnown RBP26.24■■□□□ 1.79
RNF38-205ENST00000377877 SRGAP3O43295 1099 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms