RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 GABPB2Q8TAK5 448 aaPredicted RBP6.97□□□□□ -1.29
CUBN-202ENST00000377833 UPF3BQ9BZI7 483 aaKnown RBP6.97□□□□□ -1.29
CUBN-202ENST00000377833 NUP62CLQ9H1M0 184 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 PRDM11Q9NQV5 511 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 RASAL2Q9UJF2 1139 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 ZNF608Q9ULD9 1512 aaPredicted RBP6.97□□□□□ -1.29
CUBN-202ENST00000377833 KIF5CO60282 957 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 BICDL1Q6ZP65 573 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 IQCA1Q86XH1 822 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 PRIMPOLQ96LW4 560 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 NEUROD6Q96NK8 337 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 CDC5LQ99459 802 aaKnown RBP6.97□□□□□ -1.29
CUBN-202ENST00000377833 USP25Q9UHP3 1055 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 USO1O60763 962 aaKnown RBP6.97□□□□□ -1.29
CUBN-202ENST00000377833 SERPINC1P01008 464 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 DUSP27Q5VZP5 1158 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 ZSCAN30Q86W11 494 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 CCDC183Q5T5S1 534 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 RIMS2Q9UQ26 1411 aa6.97□□□□□ -1.29
CUBN-202ENST00000377833 AXDND1Q5T1B0 1012 aaPredicted RBP6.96□□□□□ -1.29
CUBN-202ENST00000377833 CROCCP2Q86T23 111 aa6.96□□□□□ -1.29
CUBN-202ENST00000377833 KIAA1524Q8TCG1 905 aa6.96□□□□□ -1.29
CUBN-202ENST00000377833 CGNQ9P2M7 1197 aaKnown RBP6.96□□□□□ -1.29
CUBN-202ENST00000377833 NEK4P51957 841 aa6.96□□□□□ -1.29
CUBN-202ENST00000377833 YEATS2Q9ULM3 1422 aa6.96□□□□□ -1.29
CUBN-202ENST00000377833 INO80Q9ULG1 1556 aaPredicted RBP6.96□□□□□ -1.29
CUBN-202ENST00000377833 CTCFLQ8NI51 663 aaPredicted RBP6.96□□□□□ -1.29
CUBN-202ENST00000377833 EDC4Q6P2E9 1401 aaKnown RBP6.96□□□□□ -1.29
CUBN-202ENST00000377833 TNRQ92752 1358 aa6.96□□□□□ -1.29
CUBN-202ENST00000377833 BAG3O95817 575 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 IFIT1P09914 478 aaKnown RBP6.96□□□□□ -1.3
CUBN-202ENST00000377833 CABP4P57796 275 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 TUBB2AQ13885 445 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 TUBB2BQ9BVA1 445 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 CEP170Q5SW79 1584 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 STX1AQ16623 288 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 TSHZ2Q9NRE2 1034 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 CNNM1Q9NRU3 951 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 CEP126Q9P2H0 1117 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 PAXBP1Q9Y5B6 917 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 TPRNQ4KMQ1 711 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 KIF18AQ8NI77 898 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 NPATQ14207 1427 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 LDHCP07864 332 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 CADPS2Q86UW7 1296 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 SLC5A1P13866 664 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 PAXIP1Q6ZW49 1069 aaPredicted RBP6.96□□□□□ -1.3
CUBN-202ENST00000377833 CRBNQ96SW2 442 aa6.96□□□□□ -1.3
CUBN-202ENST00000377833 ANKS4BQ8N8V4 417 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.95□□□□□ -1.3
CUBN-202ENST00000377833 V9GYY5 206 aaPredicted RBP6.95□□□□□ -1.3
CUBN-202ENST00000377833 KCNG1Q9UIX4 513 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 CRACR2AQ9BSW2 395 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 YEATS4O95619 227 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
CUBN-202ENST00000377833 PRAM1Q96QH2 718 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 ATP7BP35670 1465 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 TXNDC2Q86VQ3 553 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 SPRYD3Q8NCJ5 442 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 GNAQP50148 359 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 PROSER2Q86WR7 435 aaPredicted RBP6.95□□□□□ -1.3
CUBN-202ENST00000377833 SYTL4Q96C24 671 aaPredicted RBP6.95□□□□□ -1.3
CUBN-202ENST00000377833 SURF6O75683 361 aaKnown RBP6.95□□□□□ -1.3
CUBN-202ENST00000377833 LARP1BQ659C4 914 aaKnown RBP6.95□□□□□ -1.3
CUBN-202ENST00000377833 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 PIBF1Q8WXW3 757 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 EVI5LQ96CN4 794 aa6.95□□□□□ -1.3
CUBN-202ENST00000377833 EIF2S2P20042 333 aaKnown RBP6.94□□□□□ -1.3
CUBN-202ENST00000377833 IKQ13123 557 aaPredicted RBP6.94□□□□□ -1.3
CUBN-202ENST00000377833 C6orf163Q5TEZ5 329 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 BTBD11A6QL63 1104 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 IVLP07476 585 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 KRT23Q9C075 422 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 NSRP1Q9H0G5 558 aaKnown RBP6.94□□□□□ -1.3
CUBN-202ENST00000377833 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 HLA-DOAP06340 250 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 AIMP1Q12904 312 aaKnown RBP6.94□□□□□ -1.3
CUBN-202ENST00000377833 UVSSAQ2YD98 709 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 KCNG4Q8TDN1 519 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 A2ML1A8K2U0 1454 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 NPHP3Q7Z494 1330 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 CCDC14Q49A88 953 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 CKAP4Q07065 602 aaKnown RBP6.94□□□□□ -1.3
CUBN-202ENST00000377833 ATP2A1O14983 1001 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 TSGA10Q9BZW7 698 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 ZPR1O75312 459 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 CALM1P0DP23 149 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 CALM2P0DP24 149 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 CALM3P0DP25 149 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 TMOD3Q9NYL9 352 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 ATP10DQ9P241 1426 aa6.94□□□□□ -1.3
CUBN-202ENST00000377833 CCDC194A0A1B0GVG4 234 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 BAG4O95429 457 aaKnown RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 TDO2P48775 406 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 SNX16P57768 344 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 FERMT2Q96AC1 680 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 ADGRL3Q9HAR2 1447 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 SRGAP3O43295 1099 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms