RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
POLR1E-201ENST00000377792 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
POLR1E-201ENST00000377792 CWC27Q6UX04 472 aaKnown RBP13.28□□□□□ -0.28
POLR1E-201ENST00000377792 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
POLR1E-201ENST00000377792 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
POLR1E-201ENST00000377792 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
POLR1E-201ENST00000377792 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.28
POLR1E-201ENST00000377792 SLC39A6Q13433 755 aa13.27□□□□□ -0.28
POLR1E-201ENST00000377792 ZNF790Q6PG37 636 aa13.27□□□□□ -0.28
POLR1E-201ENST00000377792 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.28
POLR1E-201ENST00000377792 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.28
POLR1E-201ENST00000377792 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.28
POLR1E-201ENST00000377792 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.29
POLR1E-201ENST00000377792 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.29
POLR1E-201ENST00000377792 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
POLR1E-201ENST00000377792 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
POLR1E-201ENST00000377792 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.29
POLR1E-201ENST00000377792 KDM6AO15550 1401 aaPredicted RBP13.26□□□□□ -0.29
POLR1E-201ENST00000377792 NASPP49321 788 aaPredicted RBP13.26□□□□□ -0.29
POLR1E-201ENST00000377792 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
POLR1E-201ENST00000377792 TTC14Q96N46 770 aa13.26□□□□□ -0.29
POLR1E-201ENST00000377792 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
POLR1E-201ENST00000377792 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
POLR1E-201ENST00000377792 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
POLR1E-201ENST00000377792 IGKV5-2P06315 115 aa13.25□□□□□ -0.29
POLR1E-201ENST00000377792 PHKG2P15735 406 aa13.25□□□□□ -0.29
POLR1E-201ENST00000377792 TATP17735 454 aaPredicted RBP13.25□□□□□ -0.29
POLR1E-201ENST00000377792 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
POLR1E-201ENST00000377792 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
POLR1E-201ENST00000377792 SASH1O94885 1247 aa13.25□□□□□ -0.29
POLR1E-201ENST00000377792 RIC3Q7Z5B4 369 aa13.25□□□□□ -0.29
POLR1E-201ENST00000377792 AACSQ86V21 672 aa13.25□□□□□ -0.29
POLR1E-201ENST00000377792 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
POLR1E-201ENST00000377792 CLCN1P35523 988 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 KCNA4P22459 653 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 G3BP1Q13283 466 aaKnown RBP eCLIP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 EVI5LQ96CN4 794 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 PPP1R9BQ96SB3 815 aa13.24□□□□□ -0.29
POLR1E-201ENST00000377792 NSFL1CQ9UNZ2 370 aaKnown RBP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
POLR1E-201ENST00000377792 MYL6BP14649 208 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 ATF3P18847 181 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 AK2P54819 239 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 PTH1RQ03431 593 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 XAGE3Q8WTP9 111 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
POLR1E-201ENST00000377792 TMEM63CQ9P1W3 806 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 MEGF6O75095 1541 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 ESPNB1AK53 854 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 MBD3O95983 291 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
POLR1E-201ENST00000377792 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
POLR1E-201ENST00000377792 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
POLR1E-201ENST00000377792 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
POLR1E-201ENST00000377792 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
POLR1E-201ENST00000377792 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
POLR1E-201ENST00000377792 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
POLR1E-201ENST00000377792 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
POLR1E-201ENST00000377792 LIMCH1Q9UPQ0 1083 aa13.22□□□□□ -0.29
POLR1E-201ENST00000377792 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
POLR1E-201ENST00000377792 TMEM94Q12767 1356 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 CSB-PGBD3P0DP91 1061 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 GCKRQ14397 625 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.29
POLR1E-201ENST00000377792 KCNB2Q92953 911 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.29
POLR1E-201ENST00000377792 RPAP1Q9BWH6 1393 aaPredicted RBP13.21□□□□□ -0.29
POLR1E-201ENST00000377792 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
POLR1E-201ENST00000377792 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 MYD88Q99836 296 aa13.21□□□□□ -0.29
POLR1E-201ENST00000377792 CYP27B1O15528 508 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
POLR1E-201ENST00000377792 CPA1P15085 419 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
POLR1E-201ENST00000377792 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
POLR1E-201ENST00000377792 SIL1Q9H173 461 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
POLR1E-201ENST00000377792 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 C5P01031 1676 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 ABCC6O95255 1503 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 NECTIN1Q15223 517 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms