RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 AFF2P51816 1311 aa20.75■□□□□ 0.91
HLA-A-202ENST00000376806 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
HLA-A-202ENST00000376806 NEXNQ0ZGT2 675 aa20.75■□□□□ 0.91
HLA-A-202ENST00000376806 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
HLA-A-202ENST00000376806 DOT1LQ8TEK3 1739 aa20.74■□□□□ 0.91
HLA-A-202ENST00000376806 SURF6O75683 361 aaKnown RBP20.74■□□□□ 0.91
HLA-A-202ENST00000376806 SDSP20132 328 aa20.74■□□□□ 0.91
HLA-A-202ENST00000376806 RBM25P49756 843 aaKnown RBP20.74■□□□□ 0.91
HLA-A-202ENST00000376806 USP21Q9UK80 565 aa20.74■□□□□ 0.91
HLA-A-202ENST00000376806 NEURL1BA8MQ27 555 aa20.73■□□□□ 0.91
HLA-A-202ENST00000376806 MX1P20591 662 aa20.73■□□□□ 0.91
HLA-A-202ENST00000376806 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
HLA-A-202ENST00000376806 TJP1Q07157 1748 aa20.73■□□□□ 0.91
HLA-A-202ENST00000376806 ANKRD13DQ6ZTN6 518 aa20.73■□□□□ 0.91
HLA-A-202ENST00000376806 MYD88Q99836 296 aa20.73■□□□□ 0.91
HLA-A-202ENST00000376806 TMOD3Q9NYL9 352 aa20.73■□□□□ 0.91
HLA-A-202ENST00000376806 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
HLA-A-202ENST00000376806 SUCLG2Q96I99 432 aa20.72■□□□□ 0.91
HLA-A-202ENST00000376806 AOX1Q06278 1338 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 NBPF26B4DH59 902 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 GCKRQ14397 625 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 HSP90AB4PQ58FF6 505 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 NBPF14Q5TI25 921 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 NBPF10Q6P3W6 841 aaKnown RBP20.71■□□□□ 0.91
HLA-A-202ENST00000376806 NBPF15Q8N660 670 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 STAP2Q9UGK3 403 aa20.71■□□□□ 0.91
HLA-A-202ENST00000376806 RHPN1Q8TCX5 695 aa20.7■□□□□ 0.9
HLA-A-202ENST00000376806 KIF1BPQ96EK5 621 aa20.7■□□□□ 0.9
HLA-A-202ENST00000376806 IL1RAPL2Q9NP60 686 aa20.7■□□□□ 0.9
HLA-A-202ENST00000376806 PTCD1O75127 700 aaKnown RBP20.69■□□□□ 0.9
HLA-A-202ENST00000376806 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
HLA-A-202ENST00000376806 KAZALD1Q96I82 304 aa20.69■□□□□ 0.9
HLA-A-202ENST00000376806 CCDC9Q9Y3X0 531 aaKnown RBP20.69■□□□□ 0.9
HLA-A-202ENST00000376806 CASC1Q6TDU7 716 aa20.69■□□□□ 0.9
HLA-A-202ENST00000376806 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
HLA-A-202ENST00000376806 SPATA31A1Q5TZJ5 1347 aa20.68■□□□□ 0.9
HLA-A-202ENST00000376806 SPATA31A5Q5VU36 1347 aa20.68■□□□□ 0.9
HLA-A-202ENST00000376806 SPATA31A7Q8IWB4 1347 aa20.68■□□□□ 0.9
HLA-A-202ENST00000376806 VPS72Q15906 364 aa20.68■□□□□ 0.9
HLA-A-202ENST00000376806 TBC1D2Q9BYX2 928 aa20.68■□□□□ 0.9
HLA-A-202ENST00000376806 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
HLA-A-202ENST00000376806 KAT6BQ8WYB5 2073 aa20.67■□□□□ 0.9
HLA-A-202ENST00000376806 BCL9O00512 1426 aa20.66■□□□□ 0.9
HLA-A-202ENST00000376806 OS9Q13438 667 aaPredicted RBP20.66■□□□□ 0.9
HLA-A-202ENST00000376806 NBR1Q14596 966 aa20.66■□□□□ 0.9
HLA-A-202ENST00000376806 PIGBQ92521 554 aa20.66■□□□□ 0.9
HLA-A-202ENST00000376806 COL15A1P39059 1388 aa20.66■□□□□ 0.9
HLA-A-202ENST00000376806 A1BGP04217 495 aa20.64■□□□□ 0.9
HLA-A-202ENST00000376806 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.9
HLA-A-202ENST00000376806 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.9
HLA-A-202ENST00000376806 EXOC5O00471 708 aa20.64■□□□□ 0.89
HLA-A-202ENST00000376806 ERC1Q8IUD2 1116 aa20.64■□□□□ 0.89
HLA-A-202ENST00000376806 PA2G4Q9UQ80 394 aaKnown RBP20.64■□□□□ 0.89
HLA-A-202ENST00000376806 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
HLA-A-202ENST00000376806 VSIG10Q8N0Z9 540 aa20.63■□□□□ 0.89
HLA-A-202ENST00000376806 CDCA7Q9BWT1 371 aaPredicted RBP20.63■□□□□ 0.89
HLA-A-202ENST00000376806 QTRT2Q9H974 415 aaKnown RBP20.63■□□□□ 0.89
HLA-A-202ENST00000376806 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
HLA-A-202ENST00000376806 ATRNO75882 1429 aa20.63■□□□□ 0.89
HLA-A-202ENST00000376806 KIF2CQ99661 725 aa20.62■□□□□ 0.89
HLA-A-202ENST00000376806 RGS17Q9UGC6 210 aaPredicted RBP20.62■□□□□ 0.89
HLA-A-202ENST00000376806 ATP5J2-PTCD1G3V325 749 aa20.62■□□□□ 0.89
HLA-A-202ENST00000376806 THRAP3Q9Y2W1 955 aaKnown RBP20.62■□□□□ 0.89
HLA-A-202ENST00000376806 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
HLA-A-202ENST00000376806 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
HLA-A-202ENST00000376806 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
HLA-A-202ENST00000376806 EPHA10Q5JZY3 1008 aa20.61■□□□□ 0.89
HLA-A-202ENST00000376806 GJD4Q96KN9 370 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-202ENST00000376806 TEX13AQ9BXU3 409 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-202ENST00000376806 TRPC5Q9UL62 973 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-202ENST00000376806 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 UBE3BQ7Z3V4 1068 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 PI4K2BQ8TCG2 481 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 ERC2O15083 957 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 HSCBQ8IWL3 235 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 DNAJC10Q8IXB1 793 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 USP26Q9BXU7 913 aa20.6■□□□□ 0.89
HLA-A-202ENST00000376806 A0A087WZG4 1122 aa20.59■□□□□ 0.89
HLA-A-202ENST00000376806 REC8O95072 547 aa20.59■□□□□ 0.89
HLA-A-202ENST00000376806 CASP7P55210 303 aa20.59■□□□□ 0.89
HLA-A-202ENST00000376806 CLASRPQ8N2M8 674 aaKnown RBP20.59■□□□□ 0.89
HLA-A-202ENST00000376806 SNX21Q969T3 373 aa20.59■□□□□ 0.89
HLA-A-202ENST00000376806 TTC41PQ6P2S7 1318 aa20.59■□□□□ 0.89
HLA-A-202ENST00000376806 BARGINQ6ZT62 677 aa20.58■□□□□ 0.89
HLA-A-202ENST00000376806 RILPL2Q969X0 211 aa20.58■□□□□ 0.89
HLA-A-202ENST00000376806 ZBTB3Q9H5J0 574 aa20.58■□□□□ 0.89
HLA-A-202ENST00000376806 G3BP1Q13283 466 aaKnown RBP eCLIP20.58■□□□□ 0.88
HLA-A-202ENST00000376806 RABL6Q3YEC7 729 aaPredicted RBP20.58■□□□□ 0.88
HLA-A-202ENST00000376806 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.88
HLA-A-202ENST00000376806 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.88
HLA-A-202ENST00000376806 ZNF772Q68DY9 489 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-202ENST00000376806 CWC25Q9NXE8 425 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-202ENST00000376806 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-202ENST00000376806 SASH1O94885 1247 aa20.56■□□□□ 0.88
HLA-A-202ENST00000376806 DDB1Q16531 1140 aa20.56■□□□□ 0.88
HLA-A-202ENST00000376806 ESYT1Q9BSJ8 1104 aa20.56■□□□□ 0.88
HLA-A-202ENST00000376806 STARD3NLO95772 234 aa20.56■□□□□ 0.88
HLA-A-202ENST00000376806 CHMLP26374 656 aa20.56■□□□□ 0.88
HLA-A-202ENST00000376806 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
HLA-A-202ENST00000376806 H7C1W4 665 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms