RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 GDPD2Q9HCC8 539 aa22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 ANXA1P04083 346 aa22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 STK11IPQ8N1F8 1099 aa22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 ZNF287Q9HBT7 754 aa22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 TRMT112Q9UI30 125 aaKnown RBP22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 GRM8O00222 908 aa22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 ZBTB7BO15156 539 aaPredicted RBP22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 KRT18P05783 430 aaKnown RBP22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 ANO8Q9HCE9 1232 aaPredicted RBP22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 CT47A1Q5JQC4 288 aaPredicted RBP22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 CAVIN4Q5BKX8 364 aa22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 ZSCAN16Q9H4T2 348 aaPredicted RBP22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 ZSCAN22P10073 491 aaPredicted RBP22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 TTF1Q15361 905 aaPredicted RBP22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 BMP2KQ9NSY1 1161 aaPredicted RBP22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 ZRANB1Q9UGI0 708 aa22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 PLEKHM2Q8IWE5 1019 aa22.79■■□□□ 1.24
TGFBR1-201ENST00000374990 TTC41PQ6P2S7 1318 aa22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 GOLIM4O00461 696 aa22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 SLC5A1P13866 664 aa22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 BCL11BQ9C0K0 894 aaPredicted RBP22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 ZBTB3Q9H5J0 574 aa22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 PHAXQ9H814 394 aaKnown RBP22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 ERLIN1O75477 346 aa22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 LDHAL6AQ6ZMR3 332 aa22.78■■□□□ 1.24
TGFBR1-201ENST00000374990 SBNO2Q9Y2G9 1366 aa22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 LRSAM1Q6UWE0 723 aa22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 IQCA1Q86XH1 822 aa22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 CWC15Q9P013 229 aaKnown RBP22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 ZFYP08048 801 aaPredicted RBP22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 PTPN14Q15678 1187 aa22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 TFIP11Q9UBB9 837 aaKnown RBP22.77■■□□□ 1.24
TGFBR1-201ENST00000374990 GOLGA8BA8MQT2 603 aa22.77■■□□□ 1.23
TGFBR1-201ENST00000374990 BABAM1Q9NWV8 329 aa22.77■■□□□ 1.23
TGFBR1-201ENST00000374990 RAB3GAP1Q15042 981 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 ATP5J2-PTCD1G3V325 749 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 SAMD1Q6SPF0 538 aaPredicted RBP22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 MYO6Q9UM54 1294 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 GCC2Q8IWJ2 1684 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 ZNF165P49910 485 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 ZSCAN23Q3MJ62 389 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 CTCFLQ8NI51 663 aaPredicted RBP22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 INTS4Q96HW7 963 aaKnown RBP22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 SLC12A7Q9Y666 1083 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 PTPRTO14522 1441 aa22.76■■□□□ 1.23
TGFBR1-201ENST00000374990 CKAP2LQ8IYA6 745 aa22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 NOM1Q5C9Z4 860 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 C16orf71Q8IYS4 520 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 FSIP1Q8NA03 581 aa22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 EYA1Q99502 592 aa22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 RBM25P49756 843 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 XRCC6P12956 609 aaKnown RBP eCLIP22.75■■□□□ 1.232e-6■■■■■ 34.5
TGFBR1-201ENST00000374990 UBXN4Q92575 508 aa22.75■■□□□ 1.23
TGFBR1-201ENST00000374990 MAGI3Q5TCQ9 1506 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 KIF18AQ8NI77 898 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 ZSCAN12O43309 604 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 LARP6Q9BRS8 491 aaKnown RBP22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 MINDY4BA8MYZ0 360 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 DEF6Q9H4E7 631 aa22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 RBM8AQ9Y5S9 174 aaKnown RBP22.74■■□□□ 1.23
TGFBR1-201ENST00000374990 COPS6Q7L5N1 327 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 XAGE3Q8WTP9 111 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 IFIT3O14879 490 aaKnown RBP22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 SEC24BO95487 1268 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 ORC3Q9UBD5 711 aaPredicted RBP22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 MAP3K19Q56UN5 1328 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 ATP7AQ04656 1500 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 TRPM2O94759 1503 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 CCT2P78371 535 aaKnown RBP22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 CLIP2Q9UDT6 1046 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 EPB41L2O43491 1005 aaKnown RBP22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 GSDMDP57764 484 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 ATP2B2Q01814 1243 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 GUCY1B3Q02153 619 aa22.73■■□□□ 1.23
TGFBR1-201ENST00000374990 EDC4Q6P2E9 1401 aaKnown RBP22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 ARHGAP29Q52LW3 1261 aa22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 NCOA7Q8NI08 942 aa22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 NUTM2BA6NNL0 878 aaPredicted RBP22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 NUTM2EB1AL46 878 aaPredicted RBP22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 NUTM2AQ8IVF1 878 aaPredicted RBP22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 IARSP41252 1262 aaKnown RBP22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 MAP3K5Q99683 1374 aa22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
TGFBR1-201ENST00000374990 GOLGA8AA7E2F4 631 aa22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 IL13P35225 146 aa22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 STX1AQ16623 288 aa22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 BRF1Q92994 677 aa22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 EXOC5O00471 708 aa22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 ADCY5O95622 1261 aa22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 FAM177A1Q8N128 213 aaPredicted RBP22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 IL15P40933 162 aaPredicted RBP22.71■■□□□ 1.23
TGFBR1-201ENST00000374990 CHL1O00533 1208 aa22.7■■□□□ 1.22
TGFBR1-201ENST00000374990 EIF3JO75822 258 aaKnown RBP22.7■■□□□ 1.22
TGFBR1-201ENST00000374990 KRT24Q2M2I5 525 aa22.7■■□□□ 1.22
TGFBR1-201ENST00000374990 ODF2Q5BJF6 829 aa22.7■■□□□ 1.22
TGFBR1-201ENST00000374990 CLCN1P35523 988 aa22.7■■□□□ 1.22
TGFBR1-201ENST00000374990 UQCRFS1P1P0C7P4 283 aa22.7■■□□□ 1.22
TGFBR1-201ENST00000374990 USP26Q9BXU7 913 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms