RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 STAP2Q9UGK3 403 aa22.28■■□□□ 1.16
RXRB-202ENST00000374685 KAT6BQ8WYB5 2073 aa22.28■■□□□ 1.16
RXRB-202ENST00000374685 IFIT2P09913 472 aaKnown RBP22.27■■□□□ 1.16
RXRB-202ENST00000374685 FOXD4L5Q5VV16 416 aaPredicted RBP22.27■■□□□ 1.16
RXRB-202ENST00000374685 CWC27Q6UX04 472 aaKnown RBP22.27■■□□□ 1.16
RXRB-202ENST00000374685 FOXD4L4Q8WXT5 416 aaPredicted RBP22.27■■□□□ 1.16
RXRB-202ENST00000374685 ST18O60284 1047 aa22.27■■□□□ 1.16
RXRB-202ENST00000374685 SSFA2P28290 1259 aa22.27■■□□□ 1.16
RXRB-202ENST00000374685 UBE3BQ7Z3V4 1068 aa22.27■■□□□ 1.16
RXRB-202ENST00000374685 PI4K2BQ8TCG2 481 aa22.27■■□□□ 1.16
RXRB-202ENST00000374685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.27■■□□□ 1.168e-7■■□□□ 11.4
RXRB-202ENST00000374685 EPHA10Q5JZY3 1008 aa22.26■■□□□ 1.15
RXRB-202ENST00000374685 CHMP3Q9Y3E7 222 aa22.26■■□□□ 1.15
RXRB-202ENST00000374685 WDR17Q8IZU2 1322 aa22.26■■□□□ 1.15
RXRB-202ENST00000374685 NEURL1BA8MQ27 555 aa22.26■■□□□ 1.15
RXRB-202ENST00000374685 ZGPATQ8N5A5 531 aaKnown RBP22.26■■□□□ 1.15
RXRB-202ENST00000374685 OVOS2A0A0G2JMS6 1433 aa22.25■■□□□ 1.15
RXRB-202ENST00000374685 G3BP1Q13283 466 aaKnown RBP eCLIP22.25■■□□□ 1.158e-8■■■■■ 29.2
RXRB-202ENST00000374685 HSP90AB4PQ58FF6 505 aa22.25■■□□□ 1.15
RXRB-202ENST00000374685 A0A0G2JS52 829 aa22.25■■□□□ 1.15
RXRB-202ENST00000374685 A1BGP04217 495 aa22.24■■□□□ 1.15
RXRB-202ENST00000374685 GCKRQ14397 625 aa22.24■■□□□ 1.15
RXRB-202ENST00000374685 HSP90AA2PQ14568 343 aaPredicted RBP22.24■■□□□ 1.15
RXRB-202ENST00000374685 PKP1Q13835 747 aa22.23■■□□□ 1.15
RXRB-202ENST00000374685 TRAK2O60296 914 aa22.23■■□□□ 1.15
RXRB-202ENST00000374685 TLR7Q9NYK1 1049 aaKnown RBP22.23■■□□□ 1.15
RXRB-202ENST00000374685 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
RXRB-202ENST00000374685 MCCP23508 829 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 DDIT3P35638 169 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 CNTROBQ8N137 903 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 METTL22Q9BUU2 404 aaPredicted RBP22.22■■□□□ 1.15
RXRB-202ENST00000374685 ZBTB3Q9H5J0 574 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 AK9Q5TCS8 1911 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 NCOA3Q9Y6Q9 1424 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 COL18A1P39060 1754 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 IL2RBP14784 551 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 LARP6Q9BRS8 491 aaKnown RBP22.22■■□□□ 1.15
RXRB-202ENST00000374685 LMTK3Q96Q04 1460 aa22.22■■□□□ 1.15
RXRB-202ENST00000374685 A0A087WZG4 1122 aa22.21■■□□□ 1.15
RXRB-202ENST00000374685 SOS2Q07890 1332 aaPredicted RBP22.21■■□□□ 1.15
RXRB-202ENST00000374685 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
RXRB-202ENST00000374685 CPDO75976 1380 aa22.21■■□□□ 1.15
RXRB-202ENST00000374685 PCDH11XQ9BZA7 1347 aa22.21■■□□□ 1.15
RXRB-202ENST00000374685 PCDH11YQ9BZA8 1340 aa22.21■■□□□ 1.15
RXRB-202ENST00000374685 SASH1O94885 1247 aa22.21■■□□□ 1.15
RXRB-202ENST00000374685 EAF2Q96CJ1 260 aaPredicted RBP22.2■■□□□ 1.14
RXRB-202ENST00000374685 C5P01031 1676 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 MTX1Q13505 466 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 RAB3GAP1Q15042 981 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 L1TD1Q5T7N2 865 aaKnown RBP22.19■■□□□ 1.14
RXRB-202ENST00000374685 BOLA2Q9H3K6 86 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 DIAPH3Q9NSV4 1193 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 NBPF26B4DH59 902 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 NBPF14Q5TI25 921 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 NBPF10Q6P3W6 841 aaKnown RBP22.19■■□□□ 1.14
RXRB-202ENST00000374685 NBPF15Q8N660 670 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 CHAMP1Q96JM3 812 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 ECHDC1Q9NTX5 307 aa22.19■■□□□ 1.14
RXRB-202ENST00000374685 XIRP1Q702N8 1843 aaKnown RBP22.19■■□□□ 1.14
RXRB-202ENST00000374685 DTNBO60941 627 aa22.18■■□□□ 1.14
RXRB-202ENST00000374685 NDUFB9Q9Y6M9 179 aa22.18■■□□□ 1.14
RXRB-202ENST00000374685 SCN11AQ9UI33 1791 aa22.18■■□□□ 1.14
RXRB-202ENST00000374685 GLRX3O76003 335 aaKnown RBP22.18■■□□□ 1.14
RXRB-202ENST00000374685 HDAC5Q9UQL6 1122 aa22.18■■□□□ 1.14
RXRB-202ENST00000374685 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
RXRB-202ENST00000374685 GBP4Q96PP9 640 aa22.17■■□□□ 1.14
RXRB-202ENST00000374685 SYTL4Q96C24 671 aaPredicted RBP22.17■■□□□ 1.14
RXRB-202ENST00000374685 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
RXRB-202ENST00000374685 LRP10Q7Z4F1 713 aa22.16■■□□□ 1.14
RXRB-202ENST00000374685 GPATCH3Q96I76 525 aa22.16■■□□□ 1.14
RXRB-202ENST00000374685 PODXL2Q9NZ53 605 aa22.16■■□□□ 1.14
RXRB-202ENST00000374685 EDC3Q96F86 508 aaKnown RBP22.16■■□□□ 1.14
RXRB-202ENST00000374685 CIZ1Q9ULV3 898 aaPredicted RBP22.16■■□□□ 1.14
RXRB-202ENST00000374685 FOXD4L6Q3SYB3 417 aaPredicted RBP22.16■■□□□ 1.14
RXRB-202ENST00000374685 FOXD4L3Q6VB84 417 aaPredicted RBP22.16■■□□□ 1.14
RXRB-202ENST00000374685 ERC1Q8IUD2 1116 aa22.16■■□□□ 1.14
RXRB-202ENST00000374685 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
RXRB-202ENST00000374685 CPA1P15085 419 aa22.15■■□□□ 1.14
RXRB-202ENST00000374685 AOX1Q06278 1338 aa22.15■■□□□ 1.14
RXRB-202ENST00000374685 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
RXRB-202ENST00000374685 DDX11L8A8MPP1 907 aa22.15■■□□□ 1.14
RXRB-202ENST00000374685 TMX3Q96JJ7 454 aa22.15■■□□□ 1.14
RXRB-202ENST00000374685 CCDC85AQ96PX6 553 aaPredicted RBP22.15■■□□□ 1.14
RXRB-202ENST00000374685 STRCQ7RTU9 1775 aa22.14■■□□□ 1.14
RXRB-202ENST00000374685 SGSM2O43147 1006 aa22.14■■□□□ 1.13
RXRB-202ENST00000374685 CLCN1P35523 988 aa22.14■■□□□ 1.13
RXRB-202ENST00000374685 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.13
RXRB-202ENST00000374685 NAP1L5Q96NT1 182 aaPredicted RBP22.13■■□□□ 1.13
RXRB-202ENST00000374685 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
RXRB-202ENST00000374685 MCTP1Q6DN14 999 aa22.12■■□□□ 1.13
RXRB-202ENST00000374685 TMOD3Q9NYL9 352 aa22.12■■□□□ 1.13
RXRB-202ENST00000374685 ASAP1Q9ULH1 1129 aa22.12■■□□□ 1.13
RXRB-202ENST00000374685 FAM227BQ96M60 508 aa22.12■■□□□ 1.13
RXRB-202ENST00000374685 TFCP2Q12800 502 aa22.12■■□□□ 1.13
RXRB-202ENST00000374685 TTC41PQ6P2S7 1318 aa22.11■■□□□ 1.13
RXRB-202ENST00000374685 NCLP19338 710 aaKnown RBP22.11■■□□□ 1.13
RXRB-202ENST00000374685 KCNJ4P48050 445 aa22.11■■□□□ 1.13
RXRB-202ENST00000374685 RASEFQ8IZ41 740 aa22.11■■□□□ 1.13
RXRB-202ENST00000374685 PLBD2Q8NHP8 589 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms