RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 IL1RAPL2Q9NP60 686 aa20.59■□□□□ 0.89
PHF1-202ENST00000374516 SNRPA1P09661 255 aaKnown RBP20.59■□□□□ 0.89
PHF1-202ENST00000374516 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
PHF1-202ENST00000374516 IL2RBP14784 551 aa20.58■□□□□ 0.89
PHF1-202ENST00000374516 FMNL2Q96PY5 1086 aa20.58■□□□□ 0.89
PHF1-202ENST00000374516 CARD10Q9BWT7 1032 aa20.58■□□□□ 0.89
PHF1-202ENST00000374516 USP26Q9BXU7 913 aa20.58■□□□□ 0.89
PHF1-202ENST00000374516 ZMYND15Q9H091 742 aa20.58■□□□□ 0.89
PHF1-202ENST00000374516 OFD1O75665 1012 aa20.58■□□□□ 0.88
PHF1-202ENST00000374516 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.88
PHF1-202ENST00000374516 CYP2E1P05181 493 aaPredicted RBP20.58■□□□□ 0.88
PHF1-202ENST00000374516 COPS6Q7L5N1 327 aa20.58■□□□□ 0.88
PHF1-202ENST00000374516 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.88
PHF1-202ENST00000374516 XAGE3Q8WTP9 111 aa20.58■□□□□ 0.88
PHF1-202ENST00000374516 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
PHF1-202ENST00000374516 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
PHF1-202ENST00000374516 LMBRD1Q9NUN5 540 aa20.57■□□□□ 0.88
PHF1-202ENST00000374516 PKD1L3Q7Z443 1732 aa20.57■□□□□ 0.88
PHF1-202ENST00000374516 POLA2Q14181 598 aa20.56■□□□□ 0.88
PHF1-202ENST00000374516 ALDH1L1O75891 902 aa20.56■□□□□ 0.88
PHF1-202ENST00000374516 MSNP26038 577 aaKnown RBP20.56■□□□□ 0.88
PHF1-202ENST00000374516 CAVIN1Q6NZI2 390 aaKnown RBP20.56■□□□□ 0.88
PHF1-202ENST00000374516 OSBPL3Q9H4L5 887 aa20.56■□□□□ 0.88
PHF1-202ENST00000374516 NCLP19338 710 aaKnown RBP20.55■□□□□ 0.88
PHF1-202ENST00000374516 MX1P20591 662 aa20.55■□□□□ 0.88
PHF1-202ENST00000374516 ZSCAN23Q3MJ62 389 aa20.55■□□□□ 0.88
PHF1-202ENST00000374516 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
PHF1-202ENST00000374516 C5P01031 1676 aa20.55■□□□□ 0.88
PHF1-202ENST00000374516 PKNOX2Q96KN3 472 aa20.55■□□□□ 0.88
PHF1-202ENST00000374516 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
PHF1-202ENST00000374516 PLEKHG2Q9H7P9 1386 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 SALL3Q9BXA9 1300 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 PDCL3Q9H2J4 239 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 CWC22Q9HCG8 908 aaKnown RBP20.54■□□□□ 0.88
PHF1-202ENST00000374516 MRC1P22897 1456 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 PKP1Q13835 747 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 HS1BP3Q53T59 392 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 NUTM1Q86Y26 1132 aa20.54■□□□□ 0.88
PHF1-202ENST00000374516 IGKV5-2P06315 115 aa20.53■□□□□ 0.88
PHF1-202ENST00000374516 ABCA3Q99758 1704 aa20.52■□□□□ 0.88
PHF1-202ENST00000374516 GRM8O00222 908 aa20.52■□□□□ 0.88
PHF1-202ENST00000374516 LRP10Q7Z4F1 713 aa20.52■□□□□ 0.88
PHF1-202ENST00000374516 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
PHF1-202ENST00000374516 RBSNQ9H1K0 784 aa20.52■□□□□ 0.88
PHF1-202ENST00000374516 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.87
PHF1-202ENST00000374516 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.87
PHF1-202ENST00000374516 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.87
PHF1-202ENST00000374516 MYD88Q99836 296 aa20.52■□□□□ 0.87
PHF1-202ENST00000374516 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.51■□□□□ 0.87
PHF1-202ENST00000374516 RAB11FIP3O75154 756 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 TERF1P54274 439 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 KAZALD1Q96I82 304 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 SUCLG2Q96I99 432 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 TRIM6-TRIM34B2RNG4 842 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
PHF1-202ENST00000374516 NEXNQ0ZGT2 675 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 RILPL2Q969X0 211 aa20.5■□□□□ 0.87
PHF1-202ENST00000374516 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
PHF1-202ENST00000374516 PA2G4Q9UQ80 394 aaKnown RBP20.5■□□□□ 0.87
PHF1-202ENST00000374516 PRPF40AO75400 957 aaKnown RBP20.49■□□□□ 0.87
PHF1-202ENST00000374516 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
PHF1-202ENST00000374516 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
PHF1-202ENST00000374516 PDLIM2Q96JY6 352 aa20.49■□□□□ 0.87
PHF1-202ENST00000374516 PARP4Q9UKK3 1724 aaKnown RBP20.49■□□□□ 0.87
PHF1-202ENST00000374516 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
PHF1-202ENST00000374516 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
PHF1-202ENST00000374516 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
PHF1-202ENST00000374516 BICC1Q9H694 974 aaKnown RBP20.49■□□□□ 0.87
PHF1-202ENST00000374516 ST18O60284 1047 aa20.48■□□□□ 0.87
PHF1-202ENST00000374516 MTX1Q13505 466 aa20.48■□□□□ 0.87
PHF1-202ENST00000374516 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
PHF1-202ENST00000374516 METTL22Q9BUU2 404 aaPredicted RBP20.48■□□□□ 0.87
PHF1-202ENST00000374516 AK9Q5TCS8 1911 aa20.48■□□□□ 0.87
PHF1-202ENST00000374516 UNC5CLQ8IV45 518 aa20.48■□□□□ 0.87
PHF1-202ENST00000374516 GPT2Q8TD30 523 aa20.48■□□□□ 0.87
PHF1-202ENST00000374516 STAP2Q9UGK3 403 aa20.48■□□□□ 0.87
PHF1-202ENST00000374516 ZDHHC9Q9Y397 364 aa20.47■□□□□ 0.87
PHF1-202ENST00000374516 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
PHF1-202ENST00000374516 GCKRQ14397 625 aa20.47■□□□□ 0.87
PHF1-202ENST00000374516 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
PHF1-202ENST00000374516 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
PHF1-202ENST00000374516 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
PHF1-202ENST00000374516 ATP5J2-PTCD1G3V325 749 aa20.46■□□□□ 0.87
PHF1-202ENST00000374516 ZNF500O60304 480 aaPredicted RBP20.46■□□□□ 0.87
PHF1-202ENST00000374516 MAP4K4O95819 1239 aaPredicted RBP20.46■□□□□ 0.87
PHF1-202ENST00000374516 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.46■□□□□ 0.87
PHF1-202ENST00000374516 A1BGP04217 495 aa20.45■□□□□ 0.87
PHF1-202ENST00000374516 UTYO14607 1347 aa20.45■□□□□ 0.86
PHF1-202ENST00000374516 HDAC5Q9UQL6 1122 aa20.45■□□□□ 0.86
PHF1-202ENST00000374516 HSP90AB4PQ58FF6 505 aa20.44■□□□□ 0.86
PHF1-202ENST00000374516 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
PHF1-202ENST00000374516 ERC2O15083 957 aa20.44■□□□□ 0.86
PHF1-202ENST00000374516 EPHA10Q5JZY3 1008 aa20.43■□□□□ 0.86
PHF1-202ENST00000374516 REC8O95072 547 aa20.43■□□□□ 0.86
PHF1-202ENST00000374516 KLHDC4Q8TBB5 520 aa20.43■□□□□ 0.86
PHF1-202ENST00000374516 R3HCC1Q9Y3T6 440 aaKnown RBP20.43■□□□□ 0.86
PHF1-202ENST00000374516 ROBO1Q9Y6N7 1651 aa20.42■□□□□ 0.86
PHF1-202ENST00000374516 SIL1Q9H173 461 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms