RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
LDB3-203ENST00000372056 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 RGL2O15211 777 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 HMMRO75330 724 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
LDB3-203ENST00000372056 MYL6BP14649 208 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 BEND3Q5T5X7 828 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 LRP10Q7Z4F1 713 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 METTL22Q9BUU2 404 aaPredicted RBP16.12■□□□□ 0.17
LDB3-203ENST00000372056 MAP3K2Q9Y2U5 619 aa16.12■□□□□ 0.17
LDB3-203ENST00000372056 ANXA1P04083 346 aa16.11■□□□□ 0.17
LDB3-203ENST00000372056 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
LDB3-203ENST00000372056 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
LDB3-203ENST00000372056 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
LDB3-203ENST00000372056 USP44Q9H0E7 712 aa16.11■□□□□ 0.17
LDB3-203ENST00000372056 ADCY9O60503 1353 aa16.1■□□□□ 0.17
LDB3-203ENST00000372056 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
LDB3-203ENST00000372056 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
LDB3-203ENST00000372056 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
LDB3-203ENST00000372056 RC3H1Q5TC82 1133 aaKnown RBP16.1■□□□□ 0.17
LDB3-203ENST00000372056 A0A087WZG4 1122 aa16.09■□□□□ 0.17
LDB3-203ENST00000372056 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
LDB3-203ENST00000372056 NBPF26B4DH59 902 aa16.08■□□□□ 0.17
LDB3-203ENST00000372056 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.17
LDB3-203ENST00000372056 A1BGP04217 495 aa16.08■□□□□ 0.17
LDB3-203ENST00000372056 UBTFL1P0CB47 393 aaPredicted RBP16.08■□□□□ 0.17
LDB3-203ENST00000372056 NBPF14Q5TI25 921 aa16.08■□□□□ 0.17
LDB3-203ENST00000372056 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.17
LDB3-203ENST00000372056 NBPF15Q8N660 670 aa16.08■□□□□ 0.17
LDB3-203ENST00000372056 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.17
LDB3-203ENST00000372056 KCNQ2O43526 872 aa16.08■□□□□ 0.16
LDB3-203ENST00000372056 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
LDB3-203ENST00000372056 C9orf78Q9NZ63 289 aaPredicted RBP16.08■□□□□ 0.16
LDB3-203ENST00000372056 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
LDB3-203ENST00000372056 SBF2Q86WG5 1849 aa16.07■□□□□ 0.16
LDB3-203ENST00000372056 UTYO14607 1347 aa16.07■□□□□ 0.16
LDB3-203ENST00000372056 TRIM28Q13263 835 aaKnown RBP16.07■□□□□ 0.16
LDB3-203ENST00000372056 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
LDB3-203ENST00000372056 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
LDB3-203ENST00000372056 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
LDB3-203ENST00000372056 PLEKHM2Q8IWE5 1019 aa16.06■□□□□ 0.16
LDB3-203ENST00000372056 TBC1D32Q96NH3 1257 aa16.06■□□□□ 0.16
LDB3-203ENST00000372056 TJP1Q07157 1748 aa16.06■□□□□ 0.16
LDB3-203ENST00000372056 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
LDB3-203ENST00000372056 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
LDB3-203ENST00000372056 BTAF1O14981 1849 aa16.05■□□□□ 0.16
LDB3-203ENST00000372056 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
LDB3-203ENST00000372056 COL15A1P39059 1388 aa16.05■□□□□ 0.16
LDB3-203ENST00000372056 MAP3K15Q6ZN16 1313 aa16.04■□□□□ 0.16
LDB3-203ENST00000372056 GRM8O00222 908 aa16.04■□□□□ 0.16
LDB3-203ENST00000372056 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
LDB3-203ENST00000372056 RREB1Q92766 1687 aa16.04■□□□□ 0.16
LDB3-203ENST00000372056 CRKLP46109 303 aaKnown RBP16.03■□□□□ 0.16
LDB3-203ENST00000372056 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
LDB3-203ENST00000372056 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
LDB3-203ENST00000372056 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
LDB3-203ENST00000372056 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
LDB3-203ENST00000372056 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
LDB3-203ENST00000372056 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
LDB3-203ENST00000372056 GCKRQ14397 625 aa16.03■□□□□ 0.16
LDB3-203ENST00000372056 GIGYF2Q6Y7W6 1299 aaKnown RBP16.03■□□□□ 0.16
LDB3-203ENST00000372056 MYD88Q99836 296 aa16.03■□□□□ 0.16
LDB3-203ENST00000372056 ZNF652Q9Y2D9 606 aa16.03■□□□□ 0.16
LDB3-203ENST00000372056 APBB1O00213 710 aa16.02■□□□□ 0.16
LDB3-203ENST00000372056 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
LDB3-203ENST00000372056 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.16
LDB3-203ENST00000372056 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.16
LDB3-203ENST00000372056 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
LDB3-203ENST00000372056 CCNL1Q9UK58 526 aaPredicted RBP16.02■□□□□ 0.16
LDB3-203ENST00000372056 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.16
LDB3-203ENST00000372056 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.15
LDB3-203ENST00000372056 LY75O60449 1722 aa16.02■□□□□ 0.15
LDB3-203ENST00000372056 ARFGEF2Q9Y6D5 1785 aa16.02■□□□□ 0.15
LDB3-203ENST00000372056 PLSCR1O15162 318 aa16.01■□□□□ 0.15
LDB3-203ENST00000372056 GSPT1P15170 499 aaKnown RBP16.01■□□□□ 0.15
LDB3-203ENST00000372056 TTC22Q5TAA0 569 aa16.01■□□□□ 0.15
LDB3-203ENST00000372056 CLEC4GQ6UXB4 293 aa16.01■□□□□ 0.15
LDB3-203ENST00000372056 CWC25Q9NXE8 425 aaPredicted RBP16.01■□□□□ 0.15
LDB3-203ENST00000372056 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
LDB3-203ENST00000372056 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
LDB3-203ENST00000372056 MFAP1P55081 439 aaKnown RBP16.01■□□□□ 0.15
LDB3-203ENST00000372056 MTX1Q13505 466 aa16.01■□□□□ 0.15
LDB3-203ENST00000372056 IGKV5-2P06315 115 aa16■□□□□ 0.15
LDB3-203ENST00000372056 ITPK1Q13572 414 aa16■□□□□ 0.15
LDB3-203ENST00000372056 POLA2Q14181 598 aa16■□□□□ 0.15
LDB3-203ENST00000372056 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
LDB3-203ENST00000372056 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
LDB3-203ENST00000372056 RPS6KA4O75676 772 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 ADRA2BP18089 450 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 PPP1R42Q7Z4L9 355 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 ISCA1Q9BUE6 129 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 LRRCC1Q9C099 1032 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 CWF19L2Q2TBE0 894 aaKnown RBP15.99■□□□□ 0.15
LDB3-203ENST00000372056 TBC1D9Q6ZT07 1266 aa15.99■□□□□ 0.15
LDB3-203ENST00000372056 PARP10Q53GL7 1025 aa15.98■□□□□ 0.15
LDB3-203ENST00000372056 AK7Q96M32 723 aa15.98■□□□□ 0.15
LDB3-203ENST00000372056 C22orf23Q9BZE7 217 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms