RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 PALLDQ8WX93 1383 aa22.83■■□□□ 1.25
CCDC17-201ENST00000372044 RPAP2Q8IXW5 612 aaPredicted RBP22.82■■□□□ 1.24
CCDC17-201ENST00000372044 MYD88Q99836 296 aa22.82■■□□□ 1.24
CCDC17-201ENST00000372044 METTL22Q9BUU2 404 aaPredicted RBP22.82■■□□□ 1.24
CCDC17-201ENST00000372044 STARD3NLO95772 234 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 UBTFL1P0CB47 393 aaPredicted RBP22.81■■□□□ 1.24
CCDC17-201ENST00000372044 LINS1Q8NG48 757 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 LY75O60449 1722 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 ANKRD36CQ5JPF3 1778 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 LOC102724428A0A0B4J2F2 783 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 ALDH1L1O75891 902 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 SIK1P57059 783 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 PLBD2Q8NHP8 589 aa22.81■■□□□ 1.24
CCDC17-201ENST00000372044 TAF1LQ8IZX4 1826 aa22.8■■□□□ 1.24
CCDC17-201ENST00000372044 ITPK1Q13572 414 aa22.8■■□□□ 1.24
CCDC17-201ENST00000372044 ZBTB1Q9Y2K1 713 aa22.8■■□□□ 1.24
CCDC17-201ENST00000372044 ZNF330Q9Y3S2 320 aaPredicted RBP22.8■■□□□ 1.24
CCDC17-201ENST00000372044 PNMA6EA0A0J9YXQ4 647 aa22.79■■□□□ 1.24
CCDC17-201ENST00000372044 NEURL1BA8MQ27 555 aa22.79■■□□□ 1.24
CCDC17-201ENST00000372044 ATP6V1AP38606 617 aa22.79■■□□□ 1.24
CCDC17-201ENST00000372044 ZBTB3Q9H5J0 574 aa22.79■■□□□ 1.24
CCDC17-201ENST00000372044 PDE4AP27815 886 aa22.78■■□□□ 1.24
CCDC17-201ENST00000372044 ATP5J2-PTCD1G3V325 749 aa22.77■■□□□ 1.24
CCDC17-201ENST00000372044 NUCB1Q02818 461 aa22.77■■□□□ 1.24
CCDC17-201ENST00000372044 DCTPP1Q9H773 170 aa22.77■■□□□ 1.24
CCDC17-201ENST00000372044 C9orf78Q9NZ63 289 aaPredicted RBP22.77■■□□□ 1.24
CCDC17-201ENST00000372044 KCNQ4P56696 695 aa22.76■■□□□ 1.23
CCDC17-201ENST00000372044 NEXNQ0ZGT2 675 aa22.76■■□□□ 1.23
CCDC17-201ENST00000372044 GCC1Q96CN9 775 aa22.76■■□□□ 1.23
CCDC17-201ENST00000372044 GRM8O00222 908 aa22.75■■□□□ 1.23
CCDC17-201ENST00000372044 GCKRQ14397 625 aa22.75■■□□□ 1.23
CCDC17-201ENST00000372044 LNPKQ9C0E8 428 aa22.75■■□□□ 1.23
CCDC17-201ENST00000372044 ATP8B2P98198 1209 aa22.75■■□□□ 1.23
CCDC17-201ENST00000372044 INTS5Q6P9B9 1019 aaKnown RBP22.75■■□□□ 1.23
CCDC17-201ENST00000372044 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
CCDC17-201ENST00000372044 UTYO14607 1347 aa22.74■■□□□ 1.23
CCDC17-201ENST00000372044 ANKRD45Q5TZF3 282 aa22.74■■□□□ 1.23
CCDC17-201ENST00000372044 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
CCDC17-201ENST00000372044 KAZALD1Q96I82 304 aa22.74■■□□□ 1.23
CCDC17-201ENST00000372044 CRKLP46109 303 aaKnown RBP22.73■■□□□ 1.23
CCDC17-201ENST00000372044 CHD1LQ86WJ1 897 aa22.73■■□□□ 1.23
CCDC17-201ENST00000372044 SUCLG2Q96I99 432 aa22.73■■□□□ 1.23
CCDC17-201ENST00000372044 IBTKQ9P2D0 1353 aaPredicted RBP22.71■■□□□ 1.23
CCDC17-201ENST00000372044 PPP1R42Q7Z4L9 355 aa22.71■■□□□ 1.23
CCDC17-201ENST00000372044 HMMRO75330 724 aa22.71■■□□□ 1.23
CCDC17-201ENST00000372044 ZNF772Q68DY9 489 aaPredicted RBP22.71■■□□□ 1.23
CCDC17-201ENST00000372044 ARXQ96QS3 562 aa22.71■■□□□ 1.23
CCDC17-201ENST00000372044 CCDC87Q9NVE4 849 aa22.71■■□□□ 1.23
CCDC17-201ENST00000372044 BCORQ6W2J9 1755 aa22.7■■□□□ 1.22
CCDC17-201ENST00000372044 APBB1O00213 710 aa22.7■■□□□ 1.22
CCDC17-201ENST00000372044 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
CCDC17-201ENST00000372044 EXOC6BQ9Y2D4 811 aa22.7■■□□□ 1.22
CCDC17-201ENST00000372044 MAP3K15Q6ZN16 1313 aa22.69■■□□□ 1.22
CCDC17-201ENST00000372044 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
CCDC17-201ENST00000372044 HLFQ16534 295 aa22.69■■□□□ 1.22
CCDC17-201ENST00000372044 SSH3Q8TE77 659 aa22.69■■□□□ 1.22
CCDC17-201ENST00000372044 RBM6P78332 1123 aaKnown RBP22.68■■□□□ 1.22
CCDC17-201ENST00000372044 KIF6Q6ZMV9 814 aa22.68■■□□□ 1.22
CCDC17-201ENST00000372044 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
CCDC17-201ENST00000372044 BICC1Q9H694 974 aaKnown RBP22.68■■□□□ 1.22
CCDC17-201ENST00000372044 SMARCA5O60264 1052 aaPredicted RBP22.68■■□□□ 1.22
CCDC17-201ENST00000372044 EIF5P55010 431 aaKnown RBP22.68■■□□□ 1.22
CCDC17-201ENST00000372044 POLA2Q14181 598 aa22.68■■□□□ 1.22
CCDC17-201ENST00000372044 EPHA10Q5JZY3 1008 aa22.68■■□□□ 1.22
CCDC17-201ENST00000372044 UBE3BQ7Z3V4 1068 aa22.68■■□□□ 1.22
CCDC17-201ENST00000372044 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
CCDC17-201ENST00000372044 SRGAP3O43295 1099 aa22.67■■□□□ 1.22
CCDC17-201ENST00000372044 CASP7P55210 303 aa22.67■■□□□ 1.22
CCDC17-201ENST00000372044 BCL11AQ9H165 835 aa22.67■■□□□ 1.22
CCDC17-201ENST00000372044 MYH3P11055 1940 aa22.67■■□□□ 1.22
CCDC17-201ENST00000372044 A0A087WZG4 1122 aa22.66■■□□□ 1.22
CCDC17-201ENST00000372044 ISCA1Q9BUE6 129 aa22.66■■□□□ 1.22
CCDC17-201ENST00000372044 RGS17Q9UGC6 210 aaPredicted RBP22.66■■□□□ 1.22
CCDC17-201ENST00000372044 TCIRG1Q13488 830 aa22.66■■□□□ 1.22
CCDC17-201ENST00000372044 MTX1Q13505 466 aa22.66■■□□□ 1.22
CCDC17-201ENST00000372044 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
CCDC17-201ENST00000372044 DZIP3Q86Y13 1208 aaKnown RBP22.65■■□□□ 1.22
CCDC17-201ENST00000372044 C16orf71Q8IYS4 520 aaPredicted RBP22.65■■□□□ 1.22
CCDC17-201ENST00000372044 CWC25Q9NXE8 425 aaPredicted RBP22.65■■□□□ 1.22
CCDC17-201ENST00000372044 GIGYF2Q6Y7W6 1299 aaKnown RBP22.64■■□□□ 1.22
CCDC17-201ENST00000372044 C4BP0C0L5 1744 aa22.64■■□□□ 1.21
CCDC17-201ENST00000372044 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
CCDC17-201ENST00000372044 TUBGCP6Q96RT7 1819 aa22.63■■□□□ 1.21
CCDC17-201ENST00000372044 H7C1W4 665 aa22.63■■□□□ 1.21
CCDC17-201ENST00000372044 C8orf34Q49A92 452 aa22.63■■□□□ 1.21
CCDC17-201ENST00000372044 CCDC191Q8NCU4 936 aa22.63■■□□□ 1.21
CCDC17-201ENST00000372044 OTUD7AQ8TE49 926 aaPredicted RBP22.63■■□□□ 1.21
CCDC17-201ENST00000372044 BACH2Q9BYV9 841 aa22.63■■□□□ 1.21
CCDC17-201ENST00000372044 BCL11BQ9C0K0 894 aaPredicted RBP22.63■■□□□ 1.21
CCDC17-201ENST00000372044 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
CCDC17-201ENST00000372044 C4AP0C0L4 1744 aa22.62■■□□□ 1.21
CCDC17-201ENST00000372044 COL15A1P39059 1388 aa22.62■■□□□ 1.21
CCDC17-201ENST00000372044 GPTP24298 496 aa22.62■■□□□ 1.21
CCDC17-201ENST00000372044 FAM196AQ6ZSG2 479 aa22.62■■□□□ 1.21
CCDC17-201ENST00000372044 CCNL1Q9UK58 526 aaPredicted RBP22.62■■□□□ 1.21
CCDC17-201ENST00000372044 PA2G4Q9UQ80 394 aaKnown RBP22.61■■□□□ 1.21
CCDC17-201ENST00000372044 SCN7AQ01118 1682 aa22.61■■□□□ 1.21
CCDC17-201ENST00000372044 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
CCDC17-201ENST00000372044 TRIM37O94972 964 aa22.6■■□□□ 1.21
CCDC17-201ENST00000372044 UBR3Q6ZT12 1888 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms