RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FGFR1OPO95684 399 aaKnown RBP25.64■■□□□ 1.69
TM9SF3-201ENST00000371142 HAND2P61296 217 aa25.64■■□□□ 1.69
TM9SF3-201ENST00000371142 PTPRCP08575 1304 aa25.63■■□□□ 1.69
TM9SF3-201ENST00000371142 VAT1LQ9HCJ6 419 aa25.63■■□□□ 1.69
TM9SF3-201ENST00000371142 MACROD2A1Z1Q3 448 aa25.63■■□□□ 1.69
TM9SF3-201ENST00000371142 PANK2Q9BZ23 570 aa25.63■■□□□ 1.69
TM9SF3-201ENST00000371142 AMOTL2Q9Y2J4 779 aa25.63■■□□□ 1.69
TM9SF3-201ENST00000371142 PRXQ9BXM0 1461 aa25.62■■□□□ 1.69
TM9SF3-201ENST00000371142 CTAGE5O15320 804 aa25.62■■□□□ 1.69
TM9SF3-201ENST00000371142 GSTTP1A0A1W2PQM5 241 aa25.62■■□□□ 1.69
TM9SF3-201ENST00000371142 WASLO00401 505 aaPredicted RBP25.62■■□□□ 1.69
TM9SF3-201ENST00000371142 CCDC91Q7Z6B0 441 aa25.62■■□□□ 1.69
TM9SF3-201ENST00000371142 TMEM67Q5HYA8 995 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 ISM2Q6H9L7 571 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 JARID2Q92833 1246 aaPredicted RBP25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 YEATS4O95619 227 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 TBC1D9Q6ZT07 1266 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 ADGRF5Q8IZF2 1346 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 IFFO1Q0D2I5 559 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 BCCIPQ9P287 314 aaKnown RBP eCLIP25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 USP16Q9Y5T5 823 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 MTIF2P46199 727 aaKnown RBP25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 ECHDC1Q9NTX5 307 aa25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 TTLL12Q14166 644 aaPredicted RBP25.61■■□□□ 1.69
TM9SF3-201ENST00000371142 MAP9Q49MG5 647 aa25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 TMC6Q7Z403 805 aa25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 C6orf229H3BNL8 230 aa25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 SPTY2D1Q68D10 685 aaPredicted RBP25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 USO1O60763 962 aaKnown RBP25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 CAMSAP2Q08AD1 1489 aa25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 SHTN1A0MZ66 631 aa25.6■■□□□ 1.69
TM9SF3-201ENST00000371142 MYCNP04198 464 aaPredicted RBP25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 CBX1P83916 185 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 FAM135AQ9P2D6 1515 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 FAM83GA6ND36 823 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 SLF2Q8IX21 1173 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 DNAI2Q9GZS0 605 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 C16orf45Q96MC5 204 aaPredicted RBP25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 LDHAL6AQ6ZMR3 332 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 MICU3Q86XE3 530 aa25.59■■□□□ 1.69
TM9SF3-201ENST00000371142 STX6O43752 255 aa25.58■■□□□ 1.69
TM9SF3-201ENST00000371142 BAG4O95429 457 aaKnown RBP25.58■■□□□ 1.69
TM9SF3-201ENST00000371142 IARSP41252 1262 aaKnown RBP25.58■■□□□ 1.69
TM9SF3-201ENST00000371142 CCDC150Q8NCX0 1101 aa25.58■■□□□ 1.69
TM9SF3-201ENST00000371142 DDX19AQ9NUU7 478 aaKnown RBP25.58■■□□□ 1.69
TM9SF3-201ENST00000371142 FBXO31Q5XUX0 539 aaPredicted RBP25.58■■□□□ 1.69
TM9SF3-201ENST00000371142 CWC25Q9NXE8 425 aaPredicted RBP25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 EHMT1Q9H9B1 1298 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 CALML4Q96GE6 196 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 GOLGA6L10A0A0M3HER8 536 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 IDEP14735 1019 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 USP8P40818 1118 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 PAFAH1B1P43034 410 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 TCERG1LQ5VWI1 586 aa25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 TTF1Q15361 905 aaPredicted RBP25.57■■□□□ 1.68
TM9SF3-201ENST00000371142 STX1AQ16623 288 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 TSPY2A6NKD2 308 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 CCDC40Q4G0X9 1142 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 RBM27Q9P2N5 1060 aaKnown RBP25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 KIF20AO95235 890 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 MBIPQ9NS73 344 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 EXOC5O00471 708 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 UBE3BQ7Z3V4 1068 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 PPP1R42Q7Z4L9 355 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 SLC26A6Q9BXS9 759 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 PRDM10Q9NQV6 1147 aa25.56■■□□□ 1.68
TM9SF3-201ENST00000371142 METAP2P50579 478 aaKnown RBP eCLIP25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 KAT14Q9H8E8 782 aa25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 NEK1Q96PY6 1258 aa25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 TCP11L1Q9NUJ3 509 aa25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 ORC3Q9UBD5 711 aaPredicted RBP25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 INCENPQ9NQS7 918 aa25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 MAGI1Q96QZ7 1491 aaPredicted RBP25.55■■□□□ 1.68
TM9SF3-201ENST00000371142 POLR3GO15318 223 aaPredicted RBP25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 MFSD6Q6ZSS7 791 aa25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 PI4KAP2A4QPH2 592 aa25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 PI4KAP1Q8N8J0 262 aa25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 TMCO5BA8MYB1 307 aa25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 MCM3P25205 808 aa25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 HMGB2P26583 209 aaKnown RBP25.54■■□□□ 1.68
TM9SF3-201ENST00000371142 RRP9O43818 475 aaKnown RBP25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 ADCY5O95622 1261 aa25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 ANXA1P04083 346 aa25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 KIF5BP33176 963 aa25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 FEZ1Q99689 392 aa25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 CD109Q6YHK3 1445 aa25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 CTNNA2P26232 953 aa25.53■■□□□ 1.68
TM9SF3-201ENST00000371142 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 KRT28Q7Z3Y7 464 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 AMPD3Q01432 767 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 CDC5LQ99459 802 aaKnown RBP25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 PDE4BQ07343 736 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 MAPK8IP2Q13387 824 aaPredicted RBP25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 CCDC12Q8WUD4 166 aaPredicted RBP25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 UBE4AQ14139 1066 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 TTC22Q5TAA0 569 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 NCOA7Q8NI08 942 aa25.52■■□□□ 1.68
TM9SF3-201ENST00000371142 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms