RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CCZ1BP86790 482 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 CCZ1P86791 482 aaPredicted RBP13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 PTH1RQ03431 593 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 ELF2Q15723 593 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 TTC21BQ7Z4L5 1316 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 NUTM1Q86Y26 1132 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 LRRC8AQ8IWT6 810 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 IQCB1Q15051 598 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 CHMP3Q9Y3E7 222 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 PAXBP1Q9Y5B6 917 aa13.92□□□□□ -0.18
SMARCA1-201ENST00000371121 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 TAF6LQ9Y6J9 622 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 MLH3Q9UHC1 1453 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 NR1I2O75469 434 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 H2AFXP16104 143 aaPredicted RBP13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 SLC4A10Q6U841 1118 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 KRT222Q8N1A0 295 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 FOXO3O43524 673 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 MCCP23508 829 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 CYP2C19P33261 490 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
SMARCA1-201ENST00000371121 A0A087WWV3 80 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 ERICH4A6NGS2 130 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 EPB41L2O43491 1005 aaKnown RBP13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 NECAB1Q8N987 351 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 TPCN1Q9ULQ1 816 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 NRXN3Q9Y4C0 1643 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 ZNF397Q8NF99 534 aaPredicted RBP13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 KCNB2Q92953 911 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 ELP1O95163 1332 aa13.9□□□□□ -0.18
SMARCA1-201ENST00000371121 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 DDX54Q8TDD1 881 aaKnown RBP13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 FMN2Q9NZ56 1722 aa13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 GNAI2P04899 355 aa13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 CASTP20810 708 aaKnown RBP13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 PLA2G4AP47712 749 aa13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 DNAJC25Q9H1X3 360 aa13.89□□□□□ -0.19
SMARCA1-201ENST00000371121 USP44Q9H0E7 712 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 AOX1Q06278 1338 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 CACNA1FO60840 1977 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 NBPF11Q86T75 865 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 SMC3Q9UQE7 1217 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 HMMRO75330 724 aa13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 HNRNPH2P55795 449 aaKnown RBP13.88□□□□□ -0.19
SMARCA1-201ENST00000371121 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 CDC25BP30305 580 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 KCND1Q9NSA2 647 aa13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
SMARCA1-201ENST00000371121 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 NPHP4O75161 1426 aaPredicted RBP13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 ADGRL3Q9HAR2 1447 aa13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 ZRANB2O95218 330 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 ZNF592Q92610 1267 aa13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 DHX40Q8IX18 779 aaKnown RBP13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 SSH3Q8TE77 659 aa13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 L2HGDHQ9H9P8 463 aa13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 SPATA31D1Q6ZQQ2 1576 aa13.86□□□□□ -0.19
SMARCA1-201ENST00000371121 NECTIN1Q15223 517 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 CWC27Q6UX04 472 aaKnown RBP13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 CCDC171Q6TFL3 1326 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 POLA2Q14181 598 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 ERCC6LQ2NKX8 1250 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 VPS53Q5VIR6 699 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 SARM1Q6SZW1 724 aa13.85□□□□□ -0.19
SMARCA1-201ENST00000371121 CCAR2Q8N163 923 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms